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SCNpilot_cont_750_p_scaffold_38

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Displaying items 1-30 of 348 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_38_1
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75..1259)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000369B43B
Mycobacterium llatzerense strain CLUC14 Mllat_contig000001, whole genome shotgun sequence {ECO:0000313|EMBL:KIU18924.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
acyl-CoA dehydrogenase
SCNpilot_cont_750_p_scaffold_38_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1256..1951)
DNA (696bp) protein (232aa)
acyl-CoA hydratase (EC:4.2.1.17); K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000379FE29
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EJZ32479.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_750_p_scaffold_38_3
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2591..3382)
DNA (792bp) protein (264aa)
short-chain dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDDFF
Short-chain dehydrogenase {ECO:0000313|EMBL:GAM48756.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
oxidoreductase, short chain dehydrogenase/reductase rbh
SCNpilot_cont_750_p_scaffold_38_4
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3417..4652
DNA (1236bp) protein (412aa)
dioxygenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDDEF
Acyl-CoA ligase {ECO:0000313|EMBL:AJE80441.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
dioxygenase large subunit rbh
SCNpilot_cont_750_p_scaffold_38_5
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4649..5131
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036E4C6B
Beta subunit of hydroxylase component of benzoate 1,2-dioxygenase {ECO:0000313|EMBL:AJE80442.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
beta subunit of hydroxylase component of benzoate 1,2-dioxygenase
SCNpilot_cont_750_p_scaffold_38_6
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5131..5346
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003678205
Uncharacterized protein {ECO:0000313|EMBL:KDE98284.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_38_7
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5343..6101
DNA (759bp) protein (253aa)
enoyl-CoA hydratase/isomerase family protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDDED
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AJE80438.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
enoyl-CoA hydratase/isomerase
SCNpilot_cont_750_p_scaffold_38_8
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6098..6901
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00038016E3
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJE80439.1}; TaxID=1888 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus.;"
enoyl-CoA hydratase rbh
SCNpilot_cont_750_p_scaffold_38_9
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6909..7139
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003641FB2
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFC82830.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
short-chain type dehydrogenase/reductase
SCNpilot_cont_750_p_scaffold_38_10
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7136..7489
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000371461F
Serine/threonine protein kinase {ECO:0000313|EMBL:KKB99488.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobacterium arupense.;"
short-chain dehydrogenase
SCNpilot_cont_750_p_scaffold_38_11
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7698..8828
DNA (1131bp) protein (377aa)
dehydratase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000366987F
L-carnitine dehydratase/bile acid-inducible protein F; K14470 mesaconyl-CoA C1-C4 CoA transferase rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ABW16162.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
SCNpilot_cont_750_p_scaffold_38_12
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8825..9769
DNA (945bp) protein (315aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003622EBA
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADB73806.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_750_p_scaffold_38_13
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9776..10939)
DNA (1164bp) protein (388aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CCW13706.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CCW13706.1};; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
acyl-CoA dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE49B
acyl-CoA dehydrogenase rbh
SCNpilot_cont_750_p_scaffold_38_14
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10979..12295)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036229B1
Mycobacterium llatzerense strain CLUC14 Mllat_contig000001, whole genome shotgun sequence {ECO:0000313|EMBL:KIU18925.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
amine oxidase rbh
SCNpilot_cont_750_p_scaffold_38_15
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12367..13041)
DNA (675bp) protein (225aa)
PASTA domain containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNJ3_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KHL03176.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
protein PASTA domain-containing protein
SCNpilot_cont_750_p_scaffold_38_16
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13051..13800)
DNA (750bp) protein (250aa)
IclR family transcriptional regulator n=3 Tax=Amycolatopsis mediterranei RepID=D8HQZ1_AMYMU
IclR family transcriptional regulator rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:AEK42675.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_750_p_scaffold_38_17
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13816..14742)
DNA (927bp) protein (309aa)
pobB; Phenoxybenzoate dioxygenase subunit beta (EC:1.-.-.-) rbh
Flavodoxin reductase family protein n=1 Tax=Frankia sp. QA3 RepID=I9A0B5_9ACTO
Flavodoxin reductase family protein {ECO:0000313|EMBL:EIV92826.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
SCNpilot_cont_750_p_scaffold_38_18
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14739..14903)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M892_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KDE12551.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_38_19
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14914..15960)
DNA (1047bp) protein (349aa)
Vanillate monooxygenase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000378864B
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:KDN17206.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
vanillate monooxygenase rbh
SCNpilot_cont_750_p_scaffold_38_20
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16069..16944)
DNA (876bp) protein (292aa)
LysR family transcriptional regulator n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262854C
Uncharacterized protein {ECO:0000313|EMBL:AIJ22813.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_750_p_scaffold_38_21
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17029..18792
DNA (1764bp) protein (588aa)
gamma-glutamyltransferase n=1 Tax=Amycolatopsis methanolica RepID=UPI00035E89B3
Gamma-glutamyltransferase {ECO:0000313|EMBL:AIJ22812.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
gamma-glutamyltransferase rbh
SCNpilot_cont_750_p_scaffold_38_22
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19067..20086
DNA (1020bp) protein (340aa)
alanine racemase (EC:5.1.1.1) rbh
Alanine racemase {ECO:0000313|EMBL:ABS05428.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ABS05428.1};; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Alanine racemase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WF39_KINRD
SCNpilot_cont_750_p_scaffold_38_23
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20418..21713
DNA (1296bp) protein (432aa)
Extracellular solute-binding protein family 1 n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WF38_KINRD
extracellular solute-binding protein; K10240 cellobiose transport system substrate-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABS05427.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_750_p_scaffold_38_24
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21718..22683
DNA (966bp) protein (322aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WF37_KINRD
ABC transporter inner membrane protein; K10241 cellobiose transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS05426.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_750_p_scaffold_38_25
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22680..23540
DNA (861bp) protein (287aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WF36_KINRD
ABC transporter inner membrane protein; K10242 cellobiose transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS05425.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_750_p_scaffold_38_26
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23549..25012
DNA (1464bp) protein (488aa)
beta-glucosidase (EC:3.2.1.21); K05350 beta-glucosidase [EC:3.2.1.21] rbh
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Beta-glucosidase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WF35_KINRD
SCNpilot_cont_750_p_scaffold_38_27
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25009..25479
DNA (471bp) protein (157aa)
Polyketide cyclase / dehydrase and lipid transport n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2X1C4_9NOCA
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:EME17464.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
phospholipid-binding protein
SCNpilot_cont_750_p_scaffold_38_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25476..25718)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Y0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25832.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_38_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25886..26128
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0X9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25831.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_38_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26149..27066
DNA (918bp) protein (306aa)
Helix-turn-helix domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0X8_PSEUX
helix-turn-helix domain-containing protein rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEA25830.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 1-30 of 348 in total

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