ggKbase home page

SCNpilot_cont_750_p_scaffold_230

Search features with annotation key words

Displaying items 1-30 of 179 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_230_1
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..163)
DNA (162bp) protein (54aa)
sodN; superoxide dismutase (EC:1.15.1.1); K00518 superoxide dismutase [EC:1.15.1.1]
superoxide dismutase n=1 Tax=Actinopolyspora mortivallis RepID=UPI00037B575D
Superoxide dismutase {ECO:0000313|EMBL:EWM15916.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SCNpilot_cont_750_p_scaffold_230_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

246..548
DNA (303bp) protein (101aa)
Peptidase S24/S26A/S26B, conserved region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRR3_PSEUX
peptidase S24/S26A/S26B, conserved region
Peptidase S24/S26A/S26B, conserved region {ECO:0000313|EMBL:AEA27280.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

763..1923
DNA (1161bp) protein (387aa)
malic protein NAD-binding protein; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] rbh
Malic protein NAD-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRQ5_PSEUX
Malic protein NAD-binding protein {ECO:0000313|EMBL:AEA27272.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2117..4912
DNA (2796bp) protein (932aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRQ4_PSEUX
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AEA27271.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_750_p_scaffold_230_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5010..6092
DNA (1083bp) protein (361aa)
Glycine betaine/L-proline ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEA27270.1}; EC=3.6.3.30 {ECO:0000313|EMBL:AEA27270.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Glycine betaine/L-proline ABC transporter, ATPase subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRQ3_PSEUX
glycine/betaine/L-proline ABC transporter ATPase; K05847 osmoprotectant transport system ATP-binding protein rbh
SCNpilot_cont_750_p_scaffold_230_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6154..6810
DNA (657bp) protein (219aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRQ2_PSEUX
ABC transporter permease; K05846 osmoprotectant transport system permease protein rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA27269.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6807..7523
DNA (717bp) protein (239aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRQ1_PSEUX
ABC transporter permease; K05846 osmoprotectant transport system permease protein rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA27268.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7547..8476
DNA (930bp) protein (310aa)
ABC-type glycine betaine transport, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRQ0_PSEUX
glycine/betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein rbh
ABC-type glycine betaine transport, periplasmic subunit {ECO:0000313|EMBL:AEA27267.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_9
unknown

Not on your lists

8553..8699
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_230_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8696..9493
DNA (798bp) protein (266aa)
MOSC domain protein beta barrel domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYY2_PSEUX
MOSC domain-containing protein beta barrel domain-containing protein; K07140 rbh
MOSC domain protein beta barrel domain protein {ECO:0000313|EMBL:AEA27707.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9705..10025
DNA (321bp) protein (107aa)
Bilirubin oxidase {ECO:0000313|EMBL:AEA27259.1}; EC=1.3.3.5 {ECO:0000313|EMBL:AEA27259.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003620884
bilirubin oxidase
SCNpilot_cont_750_p_scaffold_230_12
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10030..10533)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 29MFTsu3.1 RepID=UPI00036B9248
Uncharacterized protein {ECO:0000313|EMBL:EME24958.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_230_13
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10806..11804)
DNA (999bp) protein (333aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Streptomyces vitaminophilus RepID=UPI00035E607C
5,10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KJK57567.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
N5,N10-methylene-tetrahydromethanopterin reductase rbh
SCNpilot_cont_750_p_scaffold_230_14
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11815..13209)
DNA (1395bp) protein (465aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] rbh
phenylhydantoinase n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023794DB
Dihydropyrimidinase {ECO:0000313|EMBL:AEY92669.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
SCNpilot_cont_750_p_scaffold_230_15
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13298..14623)
DNA (1326bp) protein (442aa)
class III aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] rbh
Aminotransferase class III n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WVM0_9ACTO
Aminotransferase class III {ECO:0000313|EMBL:EFL22397.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
SCNpilot_cont_750_p_scaffold_230_16
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14714..15553)
DNA (840bp) protein (280aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] rbh
Hydrolase n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N942_9ACTO
Hydrolase {ECO:0000313|EMBL:EIF93539.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
SCNpilot_cont_750_p_scaffold_230_17
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15691..15924
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WJX1_9ACTO
Antitoxin VapB27 {ECO:0000313|EMBL:KJF15785.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_230_18
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15905..16333
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
Ribonuclease VapC n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XQU0_MICPN
hypothetical protein
SCNpilot_cont_750_p_scaffold_230_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16544..16804
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRP0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27257.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_20
unknown

Not on your lists

16801..17055
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_230_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17060..19807
DNA (2748bp) protein (916aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ59_PSEUX
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:AEA27255.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
DNA translocase FtsK rbh
SCNpilot_cont_750_p_scaffold_230_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19807..20160
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ58_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27254.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20188..21732)
DNA (1545bp) protein (515aa)
NLP/P60 protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZL5_PSEUX
NLP/P60 protein rbh
NLP/P60 protein {ECO:0000313|EMBL:AEA26687.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_24
unknown

Not on your lists

comp(21815..22012)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_230_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22103..22279)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEADB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27253.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22286..26032)
DNA (3747bp) protein (1249aa)
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:AEA27252.1}; EC=4.1.1.71 {ECO:0000313|EMBL:AEA27252.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
2-oxoglutarate dehydrogenase E1; K01616 2-oxoglutarate decarboxylase [EC:4.1.1.71] rbh
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ56_PSEUX
SCNpilot_cont_750_p_scaffold_230_27
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26176..26625
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Streptomyces auratus AGR0001 RepID=J2K1D4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJJ06553.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
hypothetical protein; K09958 hypothetical protein
SCNpilot_cont_750_p_scaffold_230_28
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26699..27532)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC6C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK45077.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_750_p_scaffold_230_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27559..28590)
DNA (1032bp) protein (344aa)
F420-dependent oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC6E
F420-dependent oxidoreductase rbh
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:AEA27250.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_230_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28629..29453)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ53_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27249.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 1-30 of 179 in total

View Taxonomy