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SCNpilot_cont_750_p_scaffold_252

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Displaying items 1-30 of 113 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_252_1
unknown

Not on your lists

comp(224..595)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_252_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(808..1278)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE086
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23203.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_252_3
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1517..2716
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSL9_BLASD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG01770.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_750_p_scaffold_252_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3058..4395
DNA (1338bp) protein (446aa)
PhoH family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY5_PSEUX
PhoH family protein; K07175 PhoH-like ATPase rbh
PhoH family protein {ECO:0000313|EMBL:AEA23205.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_252_5
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4457..4861)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RLE2_FRAAA
hypothetical protein; K06988
Uncharacterized protein {ECO:0000313|EMBL:CAJ61662.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
SCNpilot_cont_750_p_scaffold_252_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4869..6308)
DNA (1440bp) protein (480aa)
IMP dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205] rbh
IMP dehydrogenase family protein {ECO:0000313|EMBL:AEA23206.1}; EC=1.1.1.205 {ECO:0000313|EMBL:AEA23206.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE08A
SCNpilot_cont_750_p_scaffold_252_7
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6460..7050
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036E6551
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU38910.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_750_p_scaffold_252_8
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7047..10190
DNA (3144bp) protein (1048aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000371011C
AAA ATPase rbh
AAA ATPase {ECO:0000313|EMBL:AGL15245.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_750_p_scaffold_252_9
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10260..10754
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF00F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS05923.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_750_p_scaffold_252_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10762..12279)
DNA (1518bp) protein (506aa)
DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Probable DNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY8_PSEUX
SCNpilot_cont_750_p_scaffold_252_11
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12420..12920)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SD91_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76440.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_750_p_scaffold_252_12
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12983..13939
DNA (957bp) protein (319aa)
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YUR9_NOCFA
transcriptional regulator rbh
Putative transcriptional regulator {ECO:0000313|EMBL:BAD58072.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_cont_750_p_scaffold_252_13
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13936..14907)
DNA (972bp) protein (324aa)
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT n=1 Tax=Streptomyces sp. C RepID=D9VMT7_9ACTO
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJF63406.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
putative ABC transporter ATP-binding protein
SCNpilot_cont_750_p_scaffold_252_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14904..15692)
DNA (789bp) protein (263aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IZL3_FRASU
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP83931.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_750_p_scaffold_252_15
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15689..16594)
DNA (906bp) protein (302aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IZL4_FRASU
binding-protein-dependent transport system inner membrane protein; K02054 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP83932.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_750_p_scaffold_252_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16591..17730)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037AAA53
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETK31453.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative ABC transporter substrate-binding protein rbh
SCNpilot_cont_750_p_scaffold_252_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17815..18999)
DNA (1185bp) protein (395aa)
Diguanylate phosphodiesterase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIY9_PSEUX
diguanylate phosphodiesterase rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AEA23209.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_252_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19061..20461)
DNA (1401bp) protein (467aa)
class II fumarate hydratase; K01679 fumarate hydratase, class II [EC:4.2.1.2] rbh
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Fumarate hydratase class II n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ0_PSEUX
SCNpilot_cont_750_p_scaffold_252_19
unknown

Not on your lists

comp(20515..20652)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_252_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20818..21483)
DNA (666bp) protein (222aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ1_PSEUX
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEA23211.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_252_21
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21627..22706)
DNA (1080bp) protein (360aa)
fructose-1,6-bisphosphatase; K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] rbh
fructose 1,6-bisphosphatase n=1 Tax=Actinokineospora enzanensis RepID=UPI000362565E
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
SCNpilot_cont_750_p_scaffold_252_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22834..23442
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23213.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_252_23
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

23537..23905
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4310F
hypothetical protein
Tax=BJP_IG2069_Anaerolineales_43_63
SCNpilot_cont_750_p_scaffold_252_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24170..24385)
DNA (216bp) protein (72aa)
exodeoxyribonuclease 7 small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ4_PSEUX
SCNpilot_cont_750_p_scaffold_252_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24400..25644)
DNA (1245bp) protein (415aa)
exodeoxyribonuclease 7 large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] rbh
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ5_PSEUX
SCNpilot_cont_750_p_scaffold_252_26
Capitella teleta, Capitella, Capitellida, Scolecida, Annelida, Metazoa

Not on your lists

comp(25641..26993)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Capitella teleta RepID=R7U3J4_CAPTE
Uncharacterized protein {ECO:0000313|EMBL:ELU00539.1, ECO:0000313|EnsemblMetazoa:CapteP227083}; TaxID=283909 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Polychaeta; Scolecida; Capitellida; Capitellidae; Capitella.;" source="Capitella teleta (Polychaete worm).;"
bifunctional inhibitor/lipid transfer protein/seed storage protein-like protein
SCNpilot_cont_750_p_scaffold_252_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27113..28078
DNA (966bp) protein (322aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ7_PSEUX
SCNpilot_cont_750_p_scaffold_252_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28002..28481)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23218.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_252_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28673..30175)
DNA (1503bp) protein (501aa)
RmuC-domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CIZ9_PSEUX
RmuC-domain-containing protein; K09760 DNA recombination protein RmuC rbh
RmuC-domain protein {ECO:0000313|EMBL:AEA23219.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_p_scaffold_252_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30285..30782)
DNA (498bp) protein (166aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE264
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:AEA23220.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying items 1-30 of 113 in total

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