ggKbase home page

SCNpilot_cont_750_p_scaffold_194

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_194_1
unknown

Not on your lists

comp(56..187)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_194_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

859..1239
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Aeromonas veronii AER397 RepID=K1IJ48_9GAMM
Terminase {ECO:0000313|EMBL:ETD47627.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
putative terminase small subunit protein
SCNpilot_cont_750_p_scaffold_194_3
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1605..3749
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Aeromonas veronii AMC35 RepID=K1JF28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKB25198.1}; TaxID=1073385 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas veronii AMC35.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_194_4
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3956..4525
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Aeromonas hydrophila RepID=UPI00037E9C7E
Putative resolvase {ECO:0000313|EMBL:AHX61705.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media WS.;"
putative resolvase
SCNpilot_cont_750_p_scaffold_194_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4907..5608
DNA (702bp) protein (234aa)
RES domain protein n=7 Tax=Escherichia coli RepID=T2HSH3_ECOLX
RES domain protein {ECO:0000313|EMBL:BAN82945.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_194_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5637..6326)
DNA (690bp) protein (230aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=E3PYT9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AGC14185.1}; TaxID=941322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O25b:H4-ST131.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_194_7
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6785..11149
DNA (4365bp) protein (1455aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJ95_VEREI
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM57702.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_750_p_scaffold_194_8
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11146..12576
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJ96_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM57703.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_750_p_scaffold_194_9
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13563..13931)
DNA (369bp) protein (123aa)
lactoylglutathione lyase n=1 Tax=Aeromonas caviae RepID=UPI0002197AF7
Glyoxalase {ECO:0000313|EMBL:KGY77887.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_750_p_scaffold_194_10
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14465..15892
DNA (1428bp) protein (476aa)
ammonia channel protein n=1 Tax=Aeromonas caviae RepID=UPI0002197AF8
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
ammonium transporter rbh
SCNpilot_cont_750_p_scaffold_194_11
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16124..17476
DNA (1353bp) protein (451aa)
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] rbh
SAM-dependent methyltransferase n=1 Tax=Aeromonas caviae RepID=UPI0002197AF9
RNA methyltransferase {ECO:0000313|EMBL:KDV04576.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
SCNpilot_cont_750_p_scaffold_194_12
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17665..18174
DNA (510bp) protein (170aa)
acetyltransferase n=1 Tax=Aeromonas caviae RepID=UPI0002197AFA
Acetyltransferase {ECO:0000313|EMBL:KEP92392.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
acetyltransferase
SCNpilot_cont_750_p_scaffold_194_13
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18256..18426
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Aeromonas hydrophila ML09-119 RepID=R4VHR9_AERHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX62628.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media WS.;"
SCNpilot_cont_750_p_scaffold_194_14
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18395..19009)
DNA (615bp) protein (205aa)
N-terminal cleavage protein n=1 Tax=Aeromonas caviae RepID=UPI0002197AFB
N-terminal cleavage protein {ECO:0000313|EMBL:KDV04578.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
pilin rbh
SCNpilot_cont_750_p_scaffold_194_15
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19050..19838
DNA (789bp) protein (263aa)
deoxyribonuclease n=1 Tax=Aeromonas caviae RepID=UPI0002197AFC
Deoxyribonuclease {ECO:0000313|EMBL:KGY71347.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
deoxyribonuclease rbh
SCNpilot_cont_750_p_scaffold_194_16
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20052..21326
DNA (1275bp) protein (425aa)
nucleoside transporter NupC n=1 Tax=Aeromonas caviae RepID=UPI0002197AFD
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
NupC family nucleoside transporter rbh
SCNpilot_cont_750_p_scaffold_194_17
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21450..21620
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Aeromonas caviae RepID=UPI0002197AFE
XapX domain protein {ECO:0000313|EMBL:KGY77879.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_194_18
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22008..22781
DNA (774bp) protein (258aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00592};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00592}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;
2-deoxyribose-5-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4] rbh
deoxyribose-phosphate aldolase n=1 Tax=Aeromonas caviae RepID=UPI0002197AFF
SCNpilot_cont_750_p_scaffold_194_19
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22864..24195
DNA (1332bp) protein (444aa)
Thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031985};; TdRPase {ECO:0000256|HAMAP-Rule:MF_01628}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
deoA; thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4] rbh
thymidine phosphorylase n=1 Tax=Aeromonas caviae RepID=UPI0002197B00
SCNpilot_cont_750_p_scaffold_194_20
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24210..25418
DNA (1209bp) protein (403aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
deoB; phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7] rbh
phosphopentomutase n=1 Tax=Aeromonas caviae RepID=UPI0002197B01
SCNpilot_cont_750_p_scaffold_194_21
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25552..26268
DNA (717bp) protein (239aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
deoD; purine nucleoside phosphorylase (EC:2.4.2.1) rbh
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Aeromonas veronii AMC34 RepID=K1J391_9GAMM
SCNpilot_cont_750_p_scaffold_194_22
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26330..28576)
DNA (2247bp) protein (749aa)
diguanylate cyclase n=1 Tax=Aeromonas caviae RepID=UPI0002197B4F
Diguanylate cyclase {ECO:0000313|EMBL:KDV04585.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
histidine kinase-response regulator hybrid protein rbh
SCNpilot_cont_750_p_scaffold_194_23
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28642..29250)
DNA (609bp) protein (203aa)
SerB-cotransposed membrane protein n=1 Tax=Aeromonas caviae RepID=UPI0002197B50
SerB-cotransposed membrane protein {ECO:0000313|EMBL:KGY77872.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
putative SerB-cotransposed membrane protein rbh
SCNpilot_cont_750_p_scaffold_194_24
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29333..30448
DNA (1116bp) protein (372aa)
serB; phosphoserine phosphatase; K01079 phosphoserine phosphatase [EC:3.1.3.3] rbh
phosphoserine phosphatase n=1 Tax=Aeromonas caviae RepID=UPI0002197B51
Phosphoserine phosphatase {ECO:0000313|EMBL:KEP92401.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
SCNpilot_cont_750_p_scaffold_194_25
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30477..31382
DNA (906bp) protein (302aa)
alpha/beta hydrolase n=1 Tax=Aeromonas caviae RepID=UPI0002197B52
Alpha/beta hydrolase {ECO:0000313|EMBL:KGY71358.1}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
esterase/lipase rbh
SCNpilot_cont_750_p_scaffold_194_26
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31441..33816)
DNA (2376bp) protein (792aa)
type IV pilus assembly TapZ n=1 Tax=Aeromonas caviae RepID=UPI0002197B53
Pilus assembly protein TapZ {ECO:0000313|EMBL:KDV04589.1}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
type IV pilus assembly TapZ rbh
SCNpilot_cont_750_p_scaffold_194_27
Aeromonas sp. HZM, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33917..35281
DNA (1365bp) protein (455aa)
DNA repair protein radA n=2 Tax=Aeromonas media RepID=K2HWS4_AERME
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1454008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas sp. HZM.;"
DNA repair protein RadA rbh
SCNpilot_cont_750_p_scaffold_194_28
Aeromonas caviae, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35335..35721)
DNA (387bp) protein (129aa)
pilus assembly protein n=1 Tax=Aeromonas caviae RepID=UPI0002197B55
Cyclic diguanosine monophosphate-binding protein {ECO:0000256|PIRNR:PIRNR028141}; Short=c-di-GMP-binding protein {ECO:0000256|PIRNR:PIRNR028141};; Pilz domain-containing protein {ECO:0000256|PIRNR:PIRNR028141}; TaxID=648 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas caviae (Aeromonas punctata).;"
type IV pilus assembly protein PilZ
SCNpilot_cont_750_p_scaffold_194_29
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35824..36306)
DNA (483bp) protein (161aa)
Transcriptional regulatory protein AlgQ n=1 Tax=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) RepID=A0KPD4_AERHH
Anti-RNA polymerase sigma 70 factor {ECO:0000313|EMBL:KGY77867.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
algQ; anti-RNA polymerase sigma 70 factor; K07740 regulator of sigma D
SCNpilot_cont_750_p_scaffold_194_30
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36645..36917
DNA (273bp) protein (91aa)
DNA-binding protein HU-alpha n=11 Tax=Bacteria RepID=DBHA_AERHY
DNA-binding protein HU alpha
DNA-binding protein {ECO:0000313|EMBL:KGY77866.1}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
Displaying items 1-30 of 141 in total

View Taxonomy