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SCNpilot_cont_750_p_scaffold_465

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_465_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1524
DNA (1524bp) protein (508aa)
cobalt chelatase, pCobT subunit (EC:6.6.1.2); K09883 cobaltochelatase CobT [EC:6.6.1.2]
Cobalt chelatase, pCobT subunit {ECO:0000313|EMBL:ABE37526.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ABE37526.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Cobalt chelatase, pCobT subunit n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EG3_RHOPS
SCNpilot_cont_750_p_scaffold_465_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1774..2802
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BX0_RHOPB
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD86116.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_p_scaffold_465_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3011..6160
DNA (3150bp) protein (1050aa)
adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1]
Adenylate/guanylate cyclase family protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YN53_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC53028.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_750_p_scaffold_465_4
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6111..6755)
DNA (645bp) protein (215aa)
Putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SR54_9BRAD
Putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase {ECO:0000313|EMBL:CCD96681.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
S-adenosyl-L-methionine (SAM)-dependent methyltransferase
SCNpilot_cont_750_p_scaffold_465_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6763..7212)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZEH1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC52924.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_465_6
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7629..8729
DNA (1101bp) protein (367aa)
luciferase-like monooxygenase (EC:1.14.-.-); K00517 [EC:1.14.-.-] rbh
Putative Luciferase-like monooxygenase {ECO:0000313|EMBL:ABQ39408.1}; EC=1.14.-.- {ECO:0000313|EMBL:ABQ39408.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative Luciferase-like monooxygenase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETB4_BRASB
SCNpilot_cont_750_p_scaffold_465_7
bacterium YEK0313, Bacteria

Not on your lists

8963..9511
DNA (549bp) protein (183aa)
flavin oxidoreductase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035EFFAD
4-hydroxyphenylacetate 3-monooxygenase reductase component {ECO:0000313|EMBL:CEJ11387.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_465_8
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9620..11497)
DNA (1878bp) protein (626aa)
Transcriptional activator of acetoin/glycerol metabolism n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WKG4_9BRAD
ATPase AAA {ECO:0000313|EMBL:KJC57260.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
transcriptional regulator rbh
SCNpilot_cont_750_p_scaffold_465_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11588..12775)
DNA (1188bp) protein (396aa)
Chromate transporter n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BFK1_9RHIZ
chromate transporter rbh
Chromate transporter {ECO:0000313|EMBL:AGK59241.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_465_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13268..14389
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS78_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE60919.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_p_scaffold_465_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14502..15236
DNA (735bp) protein (245aa)
guanylate cyclase n=1 Tax=Rhizobium meliloti RepID=UPI00037011BD
adenylate/guanylate cyclase rbh
Guanylate cyclase {ECO:0000313|EMBL:KFG67676.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_750_p_scaffold_465_12
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15255..18230)
DNA (2976bp) protein (992aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RNY9_9RHIZ
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ESR26969.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
two-component sensor histidine kinase
SCNpilot_cont_750_p_scaffold_465_13
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18552..19499
DNA (948bp) protein (316aa)
Putative ATPase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G3N0_9BRAD
putative ATPase rbh
Putative ATPase {ECO:0000313|EMBL:BAL75367.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_750_p_scaffold_465_14
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19666..21066
DNA (1401bp) protein (467aa)
VWA containing CoxE family protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FB900D
Uncharacterized protein {ECO:0000313|EMBL:ERF82840.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
VWA containing CoxE-like; K07161
SCNpilot_cont_750_p_scaffold_465_15
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21109..21897
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI0003725269
Methyltransferase type 11 {ECO:0000313|EMBL:KIF81372.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
type 11 methyltransferase
SCNpilot_cont_750_p_scaffold_465_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22007..22645
DNA (639bp) protein (213aa)
Epoxide hydrolase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IYM9_RHOP2
epoxide hydrolase; K07025 putative hydrolase of the HAD superfamily
Epoxide hydrolase {ECO:0000313|EMBL:ABD06681.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_p_scaffold_465_17
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22834..25560)
DNA (2727bp) protein (909aa)
DNA ligase {ECO:0000313|EMBL:EAQ37207.1}; EC=6.5.1.1 {ECO:0000313|EMBL:EAQ37207.1};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ligD; ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA ligase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WS36_9BRAD
SCNpilot_cont_750_p_scaffold_465_18
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25642..26517
DNA (876bp) protein (292aa)
Probable DNA repair protein BRAO285_390025 n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S3A7_9BRAD
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_465_19
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26530..27153)
DNA (624bp) protein (208aa)
Long-chain acyl-CoA synthetase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFH2_9BRAD
TetR family transcriptional regulator {ECO:0000313|EMBL:KJC45005.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
TetR-family transcriptional regulator
SCNpilot_cont_750_p_scaffold_465_20
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27232..28512
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H1C6_9BRAD
MFS transporter {ECO:0000313|EMBL:KJC54808.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
major facilitator transporter
SCNpilot_cont_750_p_scaffold_465_21
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28529..31066)
DNA (2538bp) protein (846aa)
Putative bacteriophytochrome n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TIK2_9BRAD
Putative bacteriophytochrome {ECO:0000313|EMBL:CCE06290.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
putative bacteriophytochrome
SCNpilot_cont_750_p_scaffold_465_22
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31063..31659)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D888_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:EJZ28914.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_465_23
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31909..32691
DNA (783bp) protein (261aa)
Tetratricopeptide repeat protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QU52_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC59679.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_465_24
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32792..33505)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034893FD
Uncharacterized protein {ECO:0000313|EMBL:KJC40486.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_465_25
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33759..34121
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S284_9BRAD
conserved membrane hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD88311.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
SCNpilot_cont_750_p_scaffold_465_26
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34200..34640
DNA (441bp) protein (147aa)
UPI0003CFA631 related cluster n=1 Tax=unknown RepID=UPI0003CFA631
Uncharacterized protein {ECO:0000313|EMBL:KIH83788.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_465_27
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34812..35255
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037C2C61
Uncharacterized protein {ECO:0000313|EMBL:KJC49297.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_465_28
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35379..35837)
DNA (459bp) protein (153aa)
Putative cytochrome c n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YNA9_BRASO
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:CAL75385.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_750_p_scaffold_465_29
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35896..37047)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000309FD5E
Uncharacterized protein {ECO:0000313|EMBL:KJC52844.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_465_30
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37269..38339
DNA (1071bp) protein (357aa)
Putative unsaturated glucuronyl hydrolase n=1 Tax=Caulobacter sp. AP07 RepID=J2H5G2_9CAUL
Putative unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:EJL38070.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
Displaying items 1-30 of 57 in total

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