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SCNpilot_cont_750_p_scaffold_95

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Displaying items 1-30 of 192 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_95_1
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71..1258)
DNA (1188bp) protein (396aa)
Cyclic nucleotide-binding protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CBE2_9LEPT
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:BAO28065.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
CitT; di- and tricarboxylate transporters
SCNpilot_cont_750_p_scaffold_95_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1923..3053
DNA (1131bp) protein (377aa)
butyryl-CoA dehydrogenase (EC:1.3.99.2); K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase domain protein n=2 Tax=Delftia RepID=A9C1F0_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KFJ14028.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_750_p_scaffold_95_3
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3170..3460
DNA (291bp) protein (97aa)
UPF0225 protein PMI15_01983 n=1 Tax=Polaromonas sp. CF318 RepID=J2KXT2_9BURK
hypothetical protein; K09858 SEC-C motif domain protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_cont_750_p_scaffold_95_4
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3443..4516)
DNA (1074bp) protein (358aa)
Transcriptional regulator, AraC family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJG3_POLNA
helix-turn-helix domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_cont_750_p_scaffold_95_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4698..6302
DNA (1605bp) protein (535aa)
methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like; K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
Methylcrotonoyl-CoA carboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSQ9_ALIDB
Acetyl-CoA carboxylase {ECO:0000313|EMBL:GAO25070.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_cont_750_p_scaffold_95_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6330..6839
DNA (510bp) protein (170aa)
DinB family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC96_ACISJ
DinB family protein
DinB family protein {ECO:0000313|EMBL:ABM43871.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_cont_750_p_scaffold_95_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6836..7621
DNA (786bp) protein (262aa)
enoyl-CoA hydratase (EC:4.2.1.17) rbh
enoyl-CoA hydratase n=1 Tax=Acidovorax radicis RepID=UPI0002376A74
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_cont_750_p_scaffold_95_8
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7636..8364
DNA (729bp) protein (243aa)
Putative transmembrane protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG79_ACIET
hypothetical protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:ACM34474.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_cont_750_p_scaffold_95_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8479..10521
DNA (2043bp) protein (681aa)
3-methylcrotonoyl-CoA carboxylase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0I922_9BURK
3-methylcrotonoyl-CoA carboxylase subunit alpha {ECO:0000313|EMBL:AFU47799.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-methylcrotonoyl-CoA carboxylase subunit alpha rbh
SCNpilot_cont_750_p_scaffold_95_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10541..11449
DNA (909bp) protein (303aa)
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] rbh
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AEB86458.1}; EC=4.1.3.4 {ECO:0000313|EMBL:AEB86458.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Pyruvate carboxyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TS28_ALIDB
SCNpilot_cont_750_p_scaffold_95_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11451..12104
DNA (654bp) protein (218aa)
lysine exporter protein LysE/YggA; K05834 homoserine/homoserine lactone efflux protein id=5080370 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
lysine exporter protein LysE/YggA; K05834 homoserine/homoserine lactone efflux protein
Tax=GWE1_Burkholderiales_65_30_curated
SCNpilot_cont_750_p_scaffold_95_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12125..12637
DNA (513bp) protein (171aa)
UPI00039E4774 related cluster n=1 Tax=unknown RepID=UPI00039E4774
Prolyl-tRNA synthetase {ECO:0000313|EMBL:GAD21741.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
prolyl-tRNA synthetase
SCNpilot_cont_750_p_scaffold_95_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12701..13339
DNA (639bp) protein (213aa)
DSBA oxidoreductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG72_ACIET
dsba oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ACM34467.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_cont_750_p_scaffold_95_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13638..14135)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X7Z4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41322.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_95_15
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14429..15601)
DNA (1173bp) protein (391aa)
Type I restriction enzyme R protein n=1 Tax=Mannheimia haemolytica D35 RepID=S9ZF69_PASHA
hypothetical protein; K07504 hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_750_p_scaffold_95_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15773..16489)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034680E3
RES domain-containing protein {ECO:0000313|EMBL:GAO25510.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
RES domain-containing protein
SCNpilot_cont_750_p_scaffold_95_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16486..16863)
DNA (378bp) protein (126aa)
hypothetical protein id=12552703 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_750_p_scaffold_95_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17046..22862
DNA (5817bp) protein (1939aa)
Excinuclease ABC, A subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5A0_ALIDK
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A rbh
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_750_p_scaffold_95_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23017..23445
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8M3_ACIDE
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
SCNpilot_cont_750_p_scaffold_95_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23457..23849
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000368982C
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
30S ribosomal protein S9-like
SCNpilot_cont_750_p_scaffold_95_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24075..24794
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003759B86
Uncharacterized protein {ECO:0000313|EMBL:GAD20348.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_95_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24843..25238
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3Q4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47757.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_cont_750_p_scaffold_95_23
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25313..25630
DNA (318bp) protein (106aa)
iron--sulfur cluster insertion protein ErpA n=1 Tax=Marinobacter lipolyticus RepID=UPI0003687926
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
erpA; iron-sulfur cluster insertion protein erpA
SCNpilot_cont_750_p_scaffold_95_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25724..27133
DNA (1410bp) protein (470aa)
Major facilitator superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I587_9BURK
major facilitator superfamily protein rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:AFU47755.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_cont_750_p_scaffold_95_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27194..28315)
DNA (1122bp) protein (374aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] rbh
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000382CE4C
SCNpilot_cont_750_p_scaffold_95_26
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28335..29714)
DNA (1380bp) protein (460aa)
Peptidase M23B n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3Q2_ACISJ
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABM40877.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_cont_750_p_scaffold_95_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29890..31122
DNA (1233bp) protein (411aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
tyrosyl-tRNA ligase (EC:6.1.1.1)
tyrosyl-tRNA synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E0CD4
SCNpilot_cont_750_p_scaffold_95_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31119..32552
DNA (1434bp) protein (478aa)
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000380269B
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_cont_750_p_scaffold_95_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32549..33301
DNA (753bp) protein (251aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F9A65
ATP-binding region atpase domain protein
SCNpilot_cont_750_p_scaffold_95_30
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33374..33709)
DNA (336bp) protein (112aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZZ9_ACIDE
MerR family transcriptional regulator {ECO:0000313|EMBL:EER62315.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
MerR family transcriptional regulator
Displaying items 1-30 of 192 in total

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