ggKbase home page

SCNpilot_cont_750_p_scaffold_733

Search features with annotation key words

Displaying items 1-30 of 97 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_733_1
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119..553)
DNA (435bp) protein (145aa)
Transcriptional regulator, MerR family n=6 Tax=Proteobacteria RepID=F4G786_ALIDK
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABE37077.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_750_p_scaffold_733_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

625..975
DNA (351bp) protein (117aa)
Mercuric transport protein MerT n=3 Tax=Burkholderiales RepID=F4G785_ALIDK
Mercuric transport protein MerT; K08363 mercuric ion transport protein
Mercuric transport protein MerT {ECO:0000313|EMBL:EER59063.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_cont_750_p_scaffold_733_3
Halomonas titanicae, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

989..1264
DNA (276bp) protein (92aa)
P-type HAD superfamily ATPase n=1 Tax=Acinetobacter baumannii MSP4-16 RepID=M2YWG6_ACIBA
merP; mercuric transport periplasmic binding protein; K08364 periplasmic mercuric ion binding protein
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=1204738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas titanicae BH1.;"
SCNpilot_cont_750_p_scaffold_733_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1292..1717
DNA (426bp) protein (142aa)
Inner membrane Hg(II) uptake protein n=85 Tax=Proteobacteria RepID=Q7BRH8_ECOLX
MerC
Klebsiella pneumoniae genome assembly ST15 {ECO:0000313|EMBL:CEO85428.1}; MerC {ECO:0000313|EMBL:AAM44225.1}; Mercuric resistance protein MerC {ECO:0000313|EMBL:AIT05021.1}; Mercuric transport protein, MerC {ECO:0000313|EMBL:AJD77090.1}; Mercuric transport protein2C MerC {ECO:0000313|EMBL:AFS33679.1}; Mercuric transporter merC protein {ECO:0000313|EMBL:AFB76305.1}; Mercury transport protein MerC {ECO:0000313|EMBL:CDY79989.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriale
SCNpilot_cont_750_p_scaffold_733_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1756..3399
DNA (1644bp) protein (548aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
putative mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1] rbh
Mercuric reductase n=5 Tax=Proteobacteria RepID=F4G782_ALIDK
SCNpilot_cont_750_p_scaffold_733_6

Not on your lists

comp(3248..4060)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=uncultured bacterium pMCBF6 RepID=F2Q678_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ABO36569.1}; TaxID=429581 species="Bacteria; environmental samples.;" source="uncultured bacterium pMCBF6.;"
LysR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_733_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4264..7386)
DNA (3123bp) protein (1041aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI3_ALIDB
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:GAO21820.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
heavy metal efflux pump, czca family; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA rbh
SCNpilot_cont_750_p_scaffold_733_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7383..8867)
DNA (1485bp) protein (495aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI4_ALIDB
efflux transporter, rnd family, mfp subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV00458.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8883..10199)
DNA (1317bp) protein (439aa)
CzcC family heavy metal RND efflux outer membrane protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI5_ALIDB
czcc family heavy metal rnd efflux outer membrane protein rbh
CzcC family heavy metal RND efflux outer membrane protein {ECO:0000313|EMBL:ADV00459.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10275..10733)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00460.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10855..11115)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00461.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11151..13262)
DNA (2112bp) protein (704aa)
heavy metal translocating p-type atpase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Heavy metal translocating P-type ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI8_ALIDB
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADV00462.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13684..15546)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI9_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:ADV00463.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_733_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15641..16144)
DNA (504bp) protein (168aa)
Cytochrome c class I n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTJ0_ALIDB
cytochrome c class i rbh
Cytochrome c class I {ECO:0000313|EMBL:ADV00464.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16200..16847)
DNA (648bp) protein (216aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTJ1_ALIDB
isoprenylcysteine carboxyl methyltransferase rbh
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ADV00465.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16852..17130)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9R3_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:GAO21812.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_733_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17141..17620)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9R2_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:GAO21811.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_733_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17695..18036)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9R1_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84561.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_750_p_scaffold_733_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18091..18597)
DNA (507bp) protein (169aa)
Blue (Type 1) copper domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTJ5_ALIDB
blue (type 1) copper domain protein rbh
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ADV00469.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18620..19498)
DNA (879bp) protein (293aa)
Copper resistance B n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Q9_ALIDK
copper resistance B; K07233 copper resistance protein B rbh
Copper resistance B {ECO:0000313|EMBL:AEB84559.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_cont_750_p_scaffold_733_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19825..21684)
DNA (1860bp) protein (620aa)
Copper-resistance protein, CopA family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU66_ALIDB
Copper-resistance protein, CopA family {ECO:0000313|EMBL:ADV00471.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
copper-resistance protein, copa family rbh
SCNpilot_cont_750_p_scaffold_733_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21803..22492
DNA (690bp) protein (230aa)
Heavy metal response regulator n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU67_ALIDB
heavy metal response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR rbh
Heavy metal response regulator {ECO:0000313|EMBL:ADV00472.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_cont_750_p_scaffold_733_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22493..23896
DNA (1404bp) protein (468aa)
heavy metal sensor kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Heavy metal sensor kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU68_ALIDB
SCNpilot_cont_750_p_scaffold_733_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24028..24375
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU69_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO21803.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_733_25
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24445..25722)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Aeromonas hydrophila SSU RepID=K1K6E8_AERHY
Relaxase type IV secretory pathway VirD2 {ECO:0000313|EMBL:GAO21802.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_733_26
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25805..26803
DNA (999bp) protein (333aa)
predicted protein, partial n=1 Tax=Populus trichocarpa RepID=UPI00019400F1
hypothetical protein rbh
VirD2 components relaxase {ECO:0000313|EMBL:ERJ35800.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
SCNpilot_cont_750_p_scaffold_733_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26745..27320)
DNA (576bp) protein (192aa)
peptidase n=1 Tax=Comamonas testosteroni RepID=UPI00036F985B
Plasmid conjugal transfer transmembrane protein {ECO:0000313|EMBL:GAO24328.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
putative conjugal transfer TRAF transmembrane protein
SCNpilot_cont_750_p_scaffold_733_28
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27317..27862)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EL24_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CEG52181.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_733_29
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27859..28122)
DNA (264bp) protein (88aa)
ParB partition protein n=11 Tax=Pseudomonas aeruginosa RepID=V4M3U3_PSEAI
ParB partition protein {ECO:0000313|EMBL:KGM52072.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
parG; regulator of plasmid copy number
SCNpilot_cont_750_p_scaffold_733_30
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28341..29396)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=K1P5W8_KLEPN
PF06250 family protein {ECO:0000313|EMBL:KCB35301.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
hypothetical protein rbh
Displaying items 1-30 of 97 in total

View Taxonomy