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SCNpilot_cont_750_p_scaffold_403

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_403_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..300
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XNL4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39856.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_403_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297..1226)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WNZ5_DELAC
LysR family transcriptional regulator rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD39855.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_403_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1353..2135
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EEB606
hypothetical protein rbh
UPF0317 protein Daci_4977 {ECO:0000255|HAMAP-Rule:MF_01830}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_403_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2369..6001
DNA (3633bp) protein (1211aa)
5-oxoprolinase (EC:3.5.2.9); K01469 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] rbh
5-oxoprolinase (ATP-hydrolysing) n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X9G6_DELAC
5-oxoprolinase (ATP-hydrolysing) {ECO:0000313|EMBL:EPD46795.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_750_p_scaffold_403_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6126..7415
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X537_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD46796.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
major facilitator transporter rbh
SCNpilot_cont_750_p_scaffold_403_6
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7444..7953)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EDC919
hypothetical protein; K09983 hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF88891.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_750_p_scaffold_403_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8061..8765
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WNY8_DELAC
HAD family hydrolase {ECO:0000313|EMBL:KEH09033.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
HAD-superfamily hydrolase rbh
SCNpilot_cont_750_p_scaffold_403_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8928..9548
DNA (621bp) protein (207aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Delftia RepID=F6ARD4_DELSC
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPD39849.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_403_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9545..10579
DNA (1035bp) protein (345aa)
anti-FecI sigma factor FecR n=1 Tax=Chryseobacterium taeanense RepID=UPI00031F8470
Transmembrane sensor {ECO:0000313|EMBL:EZP63448.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor rbh
SCNpilot_cont_750_p_scaffold_403_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10851..13457
DNA (2607bp) protein (869aa)
Iron complex outermembrane recepter protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X542_DELAC
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EPD46801.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_750_p_scaffold_403_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13653..14735)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WKL1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD39846.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
metallophosphoesterase rbh
SCNpilot_cont_750_p_scaffold_403_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14831..15331)
DNA (501bp) protein (167aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] rbh
Dihydrofolate reductase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X447_DELAC
SCNpilot_cont_750_p_scaffold_403_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15353..15706)
DNA (354bp) protein (118aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XJM9_DELAC
SCNpilot_cont_750_p_scaffold_403_14
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16026..16202
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. AU12-08 RepID=S9T8X9_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EPX95229.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
SCNpilot_cont_750_p_scaffold_403_15
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16225..21558
DNA (5334bp) protein (1778aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNW1_ACCPU
Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster {ECO:0000313|EMBL:BAO82456.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
DEAD/DEAH box helicase domain-containing protein rbh
SCNpilot_cont_750_p_scaffold_403_16
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21565..24414
DNA (2850bp) protein (950aa)
Helicase domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNW2_ACCPU
Superfamily II DNA/RNA helicase, SNF2 family {ECO:0000313|EMBL:BAO82455.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
helicase domain-containing protein rbh
SCNpilot_cont_750_p_scaffold_403_17
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24419..29329
DNA (4911bp) protein (1637aa)
Putative type II DNA modification enzyme n=1 Tax=Burkholderia pseudomallei 406e RepID=A8EC53_BURPE
Type II restriction enzyme, methylase subunits {ECO:0000313|EMBL:BAO82453.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
type II DNA modification enzyme rbh
SCNpilot_cont_750_p_scaffold_403_18
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29339..31321
DNA (1983bp) protein (661aa)
Uncharacterized protein n=2 Tax=Burkholderia pseudomallei RepID=I2LTW5_BURPE
hypothetical protein rbh
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_cont_750_p_scaffold_403_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31396..32205
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8M9I9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ERV77575.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_403_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32195..35332
DNA (3138bp) protein (1046aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8MD69_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ERV77574.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
DEAD/DEAH box helicase rbh
SCNpilot_cont_750_p_scaffold_403_21
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35384..37147
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Thauera sp. 28 RepID=N6YTH2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EFI36141.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_403_22
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37144..37899
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=Q2STL2_BURTA
Predicted restriction endonuclease {ECO:0000313|EMBL:BAO82451.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_403_23
unknown

Not on your lists

38675..38893
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_403_24
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38827..39591)
DNA (765bp) protein (255aa)
Metallophosphoesterase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTV9_PUSST
metallophosphoesterase
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_cont_750_p_scaffold_403_25
unknown

Not on your lists

comp(39585..40049)
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_403_26
unknown

Not on your lists

40183..40554
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_403_27
unknown

Not on your lists

40697..40927
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_403_28
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41276..42109
DNA (834bp) protein (278aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
Thymidylate synthase n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HY17_9BURK
thymidylate synthase rbh
SCNpilot_cont_750_p_scaffold_403_29
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42188..42715)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20480 RepID=G7FVP9_9GAMM
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_cont_750_p_scaffold_403_30
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42712..44697)
DNA (1986bp) protein (662aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TET1_RICCO
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
Displaying items 1-30 of 51 in total

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