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SCNpilot_cont_750_p_scaffold_512

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Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_512_trna_1
unknown

Not on your lists

comp(1..77)
DNA (77bp)
transferRNA
SCNpilot_cont_750_p_scaffold_512_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101..1024
DNA (924bp) protein (308aa)
cysteine synthase (EC:2.5.1.47); K12339 cysteine synthase B [EC:2.5.1.47] rbh
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Cysteine synthase B n=4 Tax=Bacteria RepID=A9BYV7_DELAS
SCNpilot_cont_750_p_scaffold_512_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1102..1704
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WQP3_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42098.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
NUDIX hydrolase rbh
SCNpilot_cont_750_p_scaffold_512_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1731..1958
DNA (228bp) protein (76aa)
SirA family protein n=4 Tax=Delftia RepID=A9BYV9_DELAS
SirA-like domain-containing protein
SirA family protein {ECO:0000313|EMBL:EZP50647.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SCNpilot_cont_750_p_scaffold_512_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2044..2931)
DNA (888bp) protein (296aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] rbh
UTP-glucose-1-phosphate uridylyltransferase n=2 Tax=Delftia acidovorans RepID=S2WRZ6_DELAC
SCNpilot_cont_750_p_scaffold_512_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2943..5855)
DNA (2913bp) protein (971aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] rbh
Valine--tRNA ligase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WCY0_DELAC
SCNpilot_cont_750_p_scaffold_512_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6002..6631)
DNA (630bp) protein (210aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=4 Tax=Delftia RepID=A9BYW2_DELAS
glyoxalase/bleomycin resistance protein/dioxygenase rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37145.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_512_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6879..7772
DNA (894bp) protein (298aa)
CDF family cation efflux system protein n=2 Tax=cellular organisms RepID=S2WQN8_DELAC
Cation transporter {ECO:0000313|EMBL:KEH09458.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family rbh
SCNpilot_cont_750_p_scaffold_512_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7810..8058
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Delftia RepID=A9BYW4_DELAS
hypothetical protein; K09984 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ11185.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_750_p_scaffold_512_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8078..8431
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BYW5_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KEH09460.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_512_10
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8447..8854)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WRZ2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH09461.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_512_11
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8875..9222)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVS5_DELAC
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KEH13356.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_512_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9257..9886)
DNA (630bp) protein (210aa)
Transcriptional regulator n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XRH3_DELAC
Transcriptional regulator {ECO:0000313|EMBL:EPD42089.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
FMN-binding negative transcriptional regulator; K07734 transcriptional regulator rbh
SCNpilot_cont_750_p_scaffold_512_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9987..11492
DNA (1506bp) protein (502aa)
GntR family transcriptional regulator/MocR family aminotransferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WQN3_DELAC
GntR family transcriptional regulator/MocR family aminotransferase {ECO:0000313|EMBL:EPD42088.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase rbh
SCNpilot_cont_750_p_scaffold_512_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11557..12135)
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WBQ6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37138.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_512_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12205..12777)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WRY6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37137.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_512_16
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12870..13463)
DNA (594bp) protein (198aa)
Cytochrome b561 n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVR9_DELAC
Cytochrome B561 {ECO:0000313|EMBL:KEH09465.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
cytochrome b561; K12262 cytochrome b561 rbh
SCNpilot_cont_750_p_scaffold_512_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13662..14969)
DNA (1308bp) protein (436aa)
Heme biosynthesis-associated TPR protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XRG7_DELAC
Heme biosynthesis-associated TPR protein {ECO:0000313|EMBL:EPD42084.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
HemY domain-containing protein; K02498 HemY protein rbh
SCNpilot_cont_750_p_scaffold_512_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14989..16179)
DNA (1191bp) protein (397aa)
hypothetical protein; K02496 uroporphyrin-III C-methyltransferase [EC:2.1.1.107] rbh
Uroporphyrin-III C-methyltransferase n=2 Tax=Bacteria RepID=S2WQM8_DELAC
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EPD42083.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_750_p_scaffold_512_19
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16128..16937)
DNA (810bp) protein (270aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] rbh
Uroporphyrinogen-III synthase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XA36_DELAC
Uroporphyrinogen III synthase {ECO:0000313|EMBL:KEH09467.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_cont_750_p_scaffold_512_20
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16951..17889)
DNA (939bp) protein (313aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] rbh
Porphobilinogen deaminase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WW94_DELAC
SCNpilot_cont_750_p_scaffold_512_21
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18002..20851
DNA (2850bp) protein (950aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31); K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] rbh
phosphoenolpyruvate carboxylase n=1 Tax=Chryseobacterium taeanense RepID=UPI000311C262
SCNpilot_cont_750_p_scaffold_512_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20978..23086
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WG40_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37130.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
EAL domain-containing protein rbh
SCNpilot_cont_750_p_scaffold_512_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23123..23665)
DNA (543bp) protein (181aa)
Flagellar transcriptional regulator FlhC n=2 Tax=Delftia acidovorans RepID=S2WQM3_DELAC
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
flagellar transcriptional activator FlhC; K02402 flagellar transcriptional activator FlhC rbh
SCNpilot_cont_750_p_scaffold_512_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23693..24019)
DNA (327bp) protein (109aa)
Flagellar transcriptional regulator FlhD n=4 Tax=Delftia RepID=A9BYY1_DELAS
flagellar transcriptional activator; K02403 flagellar transcriptional activator FlhD
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_750_p_scaffold_512_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24339..25247)
DNA (909bp) protein (303aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] rbh
3-mercaptopyruvate sulfurtransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FF4FC6
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_750_p_scaffold_512_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25341..26321)
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WCV9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37126.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
small multidrug resistance protein rbh
SCNpilot_cont_750_p_scaffold_512_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26584..27723)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WG35_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37125.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Rieske (2Fe-2S) domain-containing protein rbh
SCNpilot_cont_750_p_scaffold_512_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28064..28300
DNA (237bp) protein (79aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit n=2 Tax=Delftia acidovorans RepID=S2WQL8_DELAC
SCNpilot_cont_750_p_scaffold_512_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28309..29259
DNA (951bp) protein (317aa)
Geranyltranstransferase (EC:2.5.1.10); K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] rbh
Farnesyl diphosphate synthase n=2 Tax=Bacteria RepID=S2XA26_DELAC
Farnesyl diphosphate synthase {ECO:0000313|EMBL:EPD42072.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Displaying items 1-30 of 87 in total

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