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SCNpilot_cont_750_p_scaffold_579

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Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_579_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..351)
DNA (351bp) protein (117aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI00036B904A
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KEH10965.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_750_p_scaffold_579_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

559..1464
DNA (906bp) protein (302aa)
Mesaconyl-C4 CoA hydratase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X434_DELAC
Mesaconyl-C4 CoA hydratase {ECO:0000313|EMBL:EPD34699.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein; K09709 mesaconyl-C4 CoA hydratase rbh
SCNpilot_cont_750_p_scaffold_579_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2162..2536
DNA (375bp) protein (125aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
Acyl-CoA dehydrogenase domain protein n=3 Tax=Delftia RepID=A9BPH7_DELAS
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EPD34698.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_579_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2548..3750
DNA (1203bp) protein (401aa)
fomryl-CoA transferase (EC:2.8.3.16) rbh
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WPV8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34697.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_579_5
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3790..5154
DNA (1365bp) protein (455aa)
MmgE/PrpD family protein n=2 Tax=Delftia RepID=A9BPH9_DELAS
MmgE/PrpD family protein rbh
MmgE/PrpD family protein {ECO:0000313|EMBL:AEF87245.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_750_p_scaffold_579_6
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5258..6265
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D4510B
Uncharacterized protein {ECO:0000313|EMBL:KEH13134.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_579_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6289..7161
DNA (873bp) protein (291aa)
HpcH/HpaI aldolase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] rbh
HpcH/HpaI aldolase n=2 Tax=Delftia acidovorans RepID=A9BPI1_DELAS
HpcH/HpaI aldolase {ECO:0000313|EMBL:ABX32848.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_579_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7349..8416
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPI2_DELAS
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32849.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_579_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8555..9100
DNA (546bp) protein (182aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9BPI3_DELAS
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34692.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_579_10
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9374..9862)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BWP6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EZP52034.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_579_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9859..10329)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPI5_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX32852.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_579_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10683..11147)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WTD4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43038.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
thioesterase superfamily protein rbh
SCNpilot_cont_750_p_scaffold_579_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11162..12151)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPI7_DELAS
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX32854.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_579_14
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12166..13746)
DNA (1581bp) protein (527aa)
AMP-dependent synthetase and ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BPI8_DELAS
4-coumarate--CoA ligase {ECO:0000313|EMBL:KEH10957.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
AMP-dependent synthetase/ligase rbh
SCNpilot_cont_750_p_scaffold_579_15
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13777..14745)
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9BPI9_DELAS
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34688.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_579_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15068..16372)
DNA (1305bp) protein (435aa)
glutamate dehydrogenase (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] rbh
Glutamate dehydrogenase n=2 Tax=Delftia acidovorans RepID=S2WPU0_DELAC
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
SCNpilot_cont_750_p_scaffold_579_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16549..17367
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WTC9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43033.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_579_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17392..18276)
DNA (885bp) protein (295aa)
PPK2 family polyphosphate:nucleotide phosphotransferase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XCN1_DELAC
PPK2 family polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:EPD43032.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_579_19
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18304..18717)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002DE5B7A
Uncharacterized protein {ECO:0000313|EMBL:EZP52026.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_579_20
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18714..20363)
DNA (1650bp) protein (550aa)
hemagglutinin n=1 Tax=Chryseobacterium taeanense RepID=UPI0003087CD8
Hemagglutinin {ECO:0000313|EMBL:KEH10952.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
putative hemagglutinin-like transmembrane protein rbh
SCNpilot_cont_750_p_scaffold_579_21
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20514..21425)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D83573
LysR family transcriptional regulator {ECO:0000313|EMBL:KEH10951.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_750_p_scaffold_579_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21500..21994
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WTC4_DELAC
Membrane protein {ECO:0000313|EMBL:KEH10950.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
transmembrane pair domain-containing protein rbh
SCNpilot_cont_750_p_scaffold_579_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21967..22941)
DNA (975bp) protein (325aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1D8_DELSC
two component LuxR family transcriptional regulator rbh
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KFJ13587.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_750_p_scaffold_579_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22934..26434)
DNA (3501bp) protein (1167aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WUC0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43026.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
integral membrane sensor hybrid histidine kinase rbh
SCNpilot_cont_750_p_scaffold_579_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26649..27914
DNA (1266bp) protein (422aa)
Branched-chain amino acid transport system substrate-binding protein n=3 Tax=Bacteria RepID=S2W4S6_DELAC
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:EPD43025.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
urea ABC transporter urea binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_750_p_scaffold_579_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28025..28939
DNA (915bp) protein (305aa)
Urea ABC transporter, permease UrtB n=2 Tax=Delftia acidovorans RepID=S2WPR2_DELAC
Urea ABC transporter, permease UrtB {ECO:0000313|EMBL:EPD34677.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
urea ABC transporter permease UrtB; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_cont_750_p_scaffold_579_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29012..30208
DNA (1197bp) protein (399aa)
urea ABC transporter permease n=1 Tax=Chryseobacterium taeanense RepID=UPI00030E9C63
urea ABC transporter permease UrtC; K01998 branched-chain amino acid transport system permease protein rbh
Urea ABC transporter, permease UrtC {ECO:0000313|EMBL:EPD34676.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_579_28
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30228..30971
DNA (744bp) protein (248aa)
Urea ABC transporter, ATP-binding protein UrtD n=2 Tax=Delftia acidovorans RepID=S2W8Z2_DELAC
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEH10946.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
urea ABC transporter ATP-binding protein UrtD; K01995 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_750_p_scaffold_579_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30992..31681
DNA (690bp) protein (230aa)
Urea ABC transporter, ATP-binding protein UrtE n=2 Tax=Delftia RepID=A9BPK3_DELAS
urea ABC transporter ATP-binding protein UrtE; K01996 branched-chain amino acid transport system ATP-binding protein rbh
Urea ABC transporter, ATP-binding protein UrtE {ECO:0000313|EMBL:ABX32870.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_579_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31863..33092
DNA (1230bp) protein (410aa)
formamidase (EC:3.5.1.49); K01455 formamidase [EC:3.5.1.49] rbh
Formamidase {ECO:0000313|EMBL:KFJ13793.1}; EC=3.5.1.49 {ECO:0000313|EMBL:KFJ13793.1};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
Formamidase n=3 Tax=Delftia acidovorans RepID=A9BPK4_DELAS
Displaying items 1-30 of 55 in total

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