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SCNpilot_cont_750_p_scaffold_612

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_612_trna_1
unknown

Not on your lists

2..74
DNA (73bp)
transferRNA
SCNpilot_cont_750_p_scaffold_612_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

532..1044
DNA (513bp) protein (171aa)
Type IV fimbrial biogenesis protein FimT n=3 Tax=Bacteria RepID=S2WX81_DELAC
Type IV fimbrial biogenesis protein FimT {ECO:0000313|EMBL:EPD42540.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Tfp pilus assembly protein FimT-like protein; K08084 type IV fimbrial biogenesis protein FimT rbh
SCNpilot_cont_750_p_scaffold_612_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1131..1589
DNA (459bp) protein (153aa)
Type IV pilus modification protein PilV n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZC0_DELAS
type IV pilus modification protein PilV; K02671 type IV pilus assembly protein PilV rbh
Type IV pilus modification protein PilV {ECO:0000313|EMBL:ABX35520.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_612_3
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1552..2412
DNA (861bp) protein (287aa)
Tfp pilus assembly protein PilW-like protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AU97_DELSC
Tfp pilus assembly protein PilW-like protein; K02672 type IV pilus assembly protein PilW rbh
Tfp pilus assembly protein PilW-like protein {ECO:0000313|EMBL:AEF90837.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_750_p_scaffold_612_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2409..3002
DNA (594bp) protein (198aa)
Type 4 fimbrial biogenesis protein PilX n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AU96_DELSC
Uncharacterized protein {ECO:0000313|EMBL:KFJ10591.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
type 4 fimbrial biogenesis protein PilX; K02673 type IV pilus assembly protein PilX rbh
SCNpilot_cont_750_p_scaffold_612_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..7497
DNA (4476bp) protein (1492aa)
Fimbrial assembly protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZC3_DELAS
Fimbrial assembly protein {ECO:0000313|EMBL:ABX35523.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
fimbrial assembly protein; K02674 type IV pilus assembly protein PilY1 rbh
SCNpilot_cont_750_p_scaffold_612_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7593..8006
DNA (414bp) protein (138aa)
Type IV pilus assembly protein PilE n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WZE4_DELAC
Type IV pilus assembly protein PilE {ECO:0000313|EMBL:EPD44876.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Tfp pilus assembly protein PilE-like protein; K02655 type IV pilus assembly protein PilE
SCNpilot_cont_750_p_scaffold_612_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8027..8365)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003804F9B
Uncharacterized protein {ECO:0000313|EMBL:KFJ09912.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_612_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8789..9478)
DNA (690bp) protein (230aa)
Isochorismatase hydrolase n=2 Tax=Delftia RepID=F6AU93_DELSC
isochorismatase hydrolase rbh
Isochorismatase family protein {ECO:0000313|EMBL:KFJ11316.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_cont_750_p_scaffold_612_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9489..10115)
DNA (627bp) protein (209aa)
Isochorismatase hydrolase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AU92_DELSC
Isochorismatase hydrolase {ECO:0000313|EMBL:EZP51793.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
isochorismatase hydrolase rbh
SCNpilot_cont_750_p_scaffold_612_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10248..11150
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WT44_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44880.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_750_p_scaffold_612_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11234..11734)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZC8_DELAS
hypothetical protein; K09796 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX35528.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_612_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11731..12969)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XSQ5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42529.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_612_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12971..14170)
DNA (1200bp) protein (400aa)
cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5] rbh
Di-heme enzyme n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WYN4_DELAC
Di-heme enzyme {ECO:0000313|EMBL:EPD44883.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_612_14
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14170..15117)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F28E17
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF90827.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_750_p_scaffold_612_15
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15265..15750)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AU86_DELSC
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF90826.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_750_p_scaffold_612_16
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15761..16228)
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Delftia RepID=S2WZF1_DELAC
hypothetical protein; K09796 hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEF90825.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_750_p_scaffold_612_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16289..17764)
DNA (1476bp) protein (492aa)
PepSY-associated TM helix domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWF3_VARPS
PepSY-associated TM helix domain-containing protein rbh
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:ACS18708.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_750_p_scaffold_612_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17764..19824)
DNA (2061bp) protein (687aa)
TonB-denpendent receptor n=1 Tax=Chryseobacterium taeanense RepID=UPI00031FDB3B
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EPD42523.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_750_p_scaffold_612_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19867..20358)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XB90_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42522.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_612_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20393..22231)
DNA (1839bp) protein (613aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037CB81E
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EPD42521.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_750_p_scaffold_612_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22544..22903)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X3X4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD44890.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_612_22
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23107..23610
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XSP5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH13567.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_612_trna_2
unknown

Not on your lists

comp(25083..25156)
DNA (74bp)
transferRNA
SCNpilot_cont_750_p_scaffold_612_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25242..26999)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W6G4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD35233.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
peptidase M14 carboxypeptidase A rbh
SCNpilot_cont_750_p_scaffold_612_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27239..29032)
DNA (1794bp) protein (598aa)
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
DEAD/DEAH box helicase domain-containing protein; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] rbh
ATP-dependent RNA helicase RhlE n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WRD1_DELAC
SCNpilot_cont_750_p_scaffold_612_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29300..30961
DNA (1662bp) protein (554aa)
putative ABC transporter ATP-binding protein; K06020 sulfate-transporting ATPase [EC:3.6.3.25] rbh
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZE1_DELAS
ABC transporter related {ECO:0000313|EMBL:ABX35541.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_cont_750_p_scaffold_612_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31022..33631
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XB47_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42482.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_612_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33802..34947
DNA (1146bp) protein (382aa)
monooxygenase FAD-binding; K00480 salicylate hydroxylase [EC:1.14.13.1] rbh
Salicylate hydroxylase n=2 Tax=Delftia acidovorans RepID=S2WSZ4_DELAC
Salicylate hydroxylase {ECO:0000313|EMBL:EPD35229.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
SCNpilot_cont_750_p_scaffold_612_28
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34954..35964)
DNA (1011bp) protein (337aa)
Peptidase S58 DmpA n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AU76_DELSC
peptidase S58 DmpA rbh
Peptidase S58 DmpA {ECO:0000313|EMBL:AEF90816.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Displaying items 1-30 of 48 in total

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