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SCNpilot_cont_750_p_scaffold_554

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_554_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..677
DNA (675bp) protein (225aa)
Amino acid adenylation protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU5_9GAMM
Amino acid adenylation protein {ECO:0000313|EMBL:EIL91336.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tycC5; long-chain-fatty-acid--CoA ligase
SCNpilot_cont_750_p_scaffold_554_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

802..3951
DNA (3150bp) protein (1050aa)
Amino acid adenylation protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU5_9GAMM
Amino acid adenylation protein {ECO:0000313|EMBL:EIL91336.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
enterobactin synthase multienzyme complex component, ATP-dependent
SCNpilot_cont_750_p_scaffold_554_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3998..5113
DNA (1116bp) protein (372aa)
Family 2 glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU4_9GAMM
Family 2 glycosyl transferase {ECO:0000313|EMBL:EIL91335.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
family 2 glycosyl transferase
SCNpilot_cont_750_p_scaffold_554_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5190..6614
DNA (1425bp) protein (475aa)
O-antigen polymerase family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU2_9GAMM
O-antigen polymerase family protein {ECO:0000313|EMBL:EIL91333.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
O-antigen polymerase family protein
SCNpilot_cont_750_p_scaffold_554_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6620..8170
DNA (1551bp) protein (517aa)
Putative polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU1_9GAMM
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL91332.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polysaccharide biosynthesis protein
SCNpilot_cont_750_p_scaffold_554_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8167..9513
DNA (1347bp) protein (449aa)
Polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVU0_9GAMM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL91331.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polysaccharide biosynthesis protein rbh
SCNpilot_cont_750_p_scaffold_554_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9510..10646
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003088B3C
Glycosyltransferase {ECO:0000313|EMBL:AIF48400.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_554_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10643..11815
DNA (1173bp) protein (391aa)
Group 1 family glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT8_9GAMM
Group 1 family glycosyl transferase {ECO:0000313|EMBL:EIL91329.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
group 1 family glycosyl transferase
SCNpilot_cont_750_p_scaffold_554_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11812..12453
DNA (642bp) protein (214aa)
Polysaccharide deacetylase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT7_9GAMM
Polysaccharide deacetylase {ECO:0000313|EMBL:EIL91328.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polysaccharide deacetylase
SCNpilot_cont_750_p_scaffold_554_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12450..13619
DNA (1170bp) protein (390aa)
Group 1 family glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT6_9GAMM
Group 1 family glycosyl transferase {ECO:0000313|EMBL:EIL91327.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
group 1 family glycosyl transferase rbh
SCNpilot_cont_750_p_scaffold_554_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13616..14818
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91326.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_554_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14820..15653)
DNA (834bp) protein (278aa)
Alpha/beta superfamily hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVT0_9GAMM
Alpha/beta superfamily hydrolase {ECO:0000313|EMBL:EIL91321.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
alpha/beta superfamily hydrolase
SCNpilot_cont_750_p_scaffold_554_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15650..16375)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91320.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_554_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16420..17733)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91319.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_p_scaffold_554_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17813..18589)
DNA (777bp) protein (259aa)
Protein-tyrosine kinase, Exopolysaccharide biosynthesis (EC:2.7.10.2)
Polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS7_9GAMM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL91318.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_750_p_scaffold_554_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18586..20130)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVS6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91317.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polysaccharide chain length determinant protein rbh
SCNpilot_cont_750_p_scaffold_554_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20166..20789)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003626173
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHX13683.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
wza; polysaccharide export protein; K01991 polysaccharide export outer membrane protein
SCNpilot_cont_750_p_scaffold_554_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21067..22668)
DNA (1602bp) protein (534aa)
Glycoside hydrolase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRR3_9GAMM
Glycoside hydrolase family protein {ECO:0000313|EMBL:EIM02155.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
beta-xylosidase
SCNpilot_cont_750_p_scaffold_554_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22665..24062)
DNA (1398bp) protein (466aa)
Beta-glucosidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUG3_9GAMM
beta-galactosidase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_554_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24161..25312
DNA (1152bp) protein (384aa)
Multiple sugar ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC4_9GAMM
carbohydrate ABC transporter ATP-binding protein, CUT1 family rbh
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGG90972.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_554_21
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25345..27558)
DNA (2214bp) protein (738aa)
Alpha-N-acetylglucosaminidase (EC:3.2.1.50) rbh
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000374411B
Alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:AIF46031.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_750_p_scaffold_554_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27555..28376)
DNA (822bp) protein (274aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NU85_9GAMM
carbohydrate ABC transporter membrane protein 2, CUT1 family rbh
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:AGG90981.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_554_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28373..29248)
DNA (876bp) protein (292aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB6_9GAMM
carbohydrate ABC transporter membrane protein 1, CUT1 family rbh
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AGG90980.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_554_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29245..30525)
DNA (1281bp) protein (427aa)
Family 1 extracellular solute-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB7_9GAMM
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIL90848.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family rbh
SCNpilot_cont_750_p_scaffold_554_25
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(30621..32120)
DNA (1500bp) protein (500aa)
xylan 1,4-beta-xylosidase; K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37] rbh
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:AEU38534.1}; EC=3.2.1.37 {ECO:0000313|EMBL:AEU38534.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D3267
SCNpilot_cont_750_p_scaffold_554_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32130..33629)
DNA (1500bp) protein (500aa)
Tat pathway signal protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003493E52
Uncharacterized protein {ECO:0000313|EMBL:EIL97030.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_554_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33712..35241)
DNA (1530bp) protein (510aa)
tryptophan halogenase; K14266 FADH2 O2-dependent halogenase I [EC:1.14.14.7]
tryptophan halogenase n=1 Tax=Dyella ginsengisoli RepID=UPI0003478D1B
Tryptophan halogenase {ECO:0000313|EMBL:EIL97031.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_750_p_scaffold_554_28
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35368..38415)
DNA (3048bp) protein (1016aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000381A0C1
TonB-dependent receptor
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_554_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38436..39500)
DNA (1065bp) protein (355aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC42_9GAMM
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL97033.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
SCNpilot_cont_750_p_scaffold_554_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40281..41870
DNA (1590bp) protein (530aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
2-isopropylmalate synthase (EC:2.3.3.13) rbh
2-isopropylmalate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C2_9GAMM
Displaying items 1-30 of 45 in total

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