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SCNpilot_cont_750_p_scaffold_709

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Displaying items 1-30 of 171 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_709_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1298
DNA (1296bp) protein (432aa)
Cytochrome b n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E1_9GAMM
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome b subunit of the bc complex rbh
SCNpilot_cont_750_p_scaffold_709_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1291..2046
DNA (756bp) protein (252aa)
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W839_9GAMM
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit {ECO:0000313|EMBL:EIL95630.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c1 rbh
SCNpilot_cont_750_p_scaffold_709_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2139..2762
DNA (624bp) protein (208aa)
Stringent starvation protein A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0E3_9GAMM
Stringent starvation protein A {ECO:0000313|EMBL:EIL92934.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione S-transferase rbh
SCNpilot_cont_750_p_scaffold_709_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2762..3208
DNA (447bp) protein (149aa)
ClpXP protease specificity-enhancing factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBN5_9GAMM
stringent starvation protein B
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_709_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3239..3703)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NK28_9GAMM
Protein of unknown function (DUF3301)
Uncharacterized protein {ECO:0000313|EMBL:AGG90013.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_709_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3757..4614)
DNA (858bp) protein (286aa)
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19) rbh
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) {ECO:0000313|EMBL:AGG90012.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AGG90012.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG6_9GAMM
SCNpilot_cont_750_p_scaffold_709_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4611..6857)
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99705.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF1631) rbh
SCNpilot_cont_750_p_scaffold_709_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6945..7217)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037EA558
Uncharacterized protein {ECO:0000313|EMBL:AHX12298.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_709_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7279..7782
DNA (504bp) protein (168aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulv
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMC3_9GAMM
5-(carboxyamino)imidazole ribonucleotide mutase
SCNpilot_cont_750_p_scaffold_709_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7779..8936
DNA (1158bp) protein (386aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NK22_9GAMM
5-(carboxyamino)imidazole ribonucleotide synthase rbh
SCNpilot_cont_750_p_scaffold_709_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9151..10029)
DNA (879bp) protein (293aa)
endo-1,4-D-glucanase n=1 Tax=Dyella japonica RepID=UPI00030452D8
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
translation elongation factor Ts (EF-Ts)
SCNpilot_cont_750_p_scaffold_709_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10126..11007)
DNA (882bp) protein (294aa)
30S ribosomal protein S2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WNP9_9GAMM
ribosomal protein S2 rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_p_scaffold_709_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11372..12100
DNA (729bp) protein (243aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Methionine aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNQ0_9GAMM
methionine aminopeptidase, type I
SCNpilot_cont_750_p_scaffold_709_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12223..14697)
DNA (2475bp) protein (825aa)
peptidase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003468B54
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
Peptidase S9 prolyl oligopeptidase active site domain-containing protein {ECO:0000313|EMBL:AEM51900.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_750_p_scaffold_709_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14847..17522
DNA (2676bp) protein (892aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIG6_9GAMM
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
(protein-PII) uridylyltransferase
SCNpilot_cont_750_p_scaffold_709_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17613..18080
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W557_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94598.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_709_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18176..19003
DNA (828bp) protein (276aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117) rbh
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Dyella japonica RepID=UPI0002EEAB63
SCNpilot_cont_750_p_scaffold_709_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19000..19356
DNA (357bp) protein (119aa)
Spx/MgsR family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIH0_9GAMM
Arsenate reductase {ECO:0000313|EMBL:AHX14208.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
transcriptional regulator, Spx/MgsR family
SCNpilot_cont_750_p_scaffold_709_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19361..20425
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIH2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87013.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_709_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20474..21628
DNA (1155bp) protein (385aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3H5_9GAMM
SCNpilot_cont_750_p_scaffold_709_21
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21769..23145
DNA (1377bp) protein (459aa)
beta-lactamase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EED0E9
Beta-lactamase {ECO:0000313|EMBL:EYR65697.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein rbh
SCNpilot_cont_750_p_scaffold_709_22
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23177..23563
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1KBQ1_BURCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA95648.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
SCNpilot_cont_750_p_scaffold_709_23
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23663..24349
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2L9F3_BURGS
Uncharacterized protein {ECO:0000313|EMBL:KEZ78999.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_709_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24357..26768)
DNA (2412bp) protein (804aa)
Penicillin amidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYR8_9GAMM
penicilin amidase
Penicilin amidase {ECO:0000313|EMBL:AGG89846.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_p_scaffold_709_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26765..27565)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZB2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92553.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative periplasmic protein rbh
SCNpilot_cont_750_p_scaffold_709_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27680..28168
DNA (489bp) protein (163aa)
7,8-dihydro-8-oxoguanine-triphosphatase n=1 Tax=Dyella ginsengisoli RepID=UPI00035F160F
Zn-finger containing NTP pyrophosphohydrolase
Nudix hydrolase family protein {ECO:0000313|EMBL:EIL94038.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_750_p_scaffold_709_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28147..28566
DNA (420bp) protein (140aa)
MutT/nudix family phosphohydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
Hydrolase, nudix family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3J8_9GAMM
Hydrolase, nudix family protein {ECO:0000313|EMBL:EIL94039.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_750_p_scaffold_709_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28577..29353)
DNA (777bp) protein (259aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAX0_9GAMM
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EIL96611.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
lipoate-protein ligase A rbh
SCNpilot_cont_750_p_scaffold_709_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29350..29640)
DNA (291bp) protein (97aa)
Lipoate-protein ligase A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU45_9GAMM
Lipoate-protein ligase A {ECO:0000313|EMBL:EIM02987.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_709_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29708..30145)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYS6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89838.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 171 in total

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