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SCNpilot_cont_750_p_scaffold_3974

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3974_1
Vibrio splendidus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..159)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Vibrio splendidus 12B01 RepID=A3URZ0_VIBSP
Uncharacterized protein {ECO:0000313|EMBL:EAP94797.1}; TaxID=314291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio splendidus 12B01.;"
SCNpilot_cont_750_p_scaffold_3974_trna_2
unknown

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comp(1..72)
DNA (72bp)
transferRNA
SCNpilot_cont_750_p_scaffold_3974_trna_1
unknown

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comp(121..202)
DNA (82bp)
transferRNA
SCNpilot_cont_750_p_scaffold_3974_2
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(260..589)
DNA (330bp) protein (110aa)
Preprotein translocase, SecG subunit n=2 Tax=Acinetobacter RepID=N8PP35_9GAMM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ENU28321.1}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
SCNpilot_cont_750_p_scaffold_3974_3
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(602..1393)
DNA (792bp) protein (264aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] rbh
Triosephosphate isomerase n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9LRG9_9GAMM
SCNpilot_cont_750_p_scaffold_3974_4
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1737..3452
DNA (1716bp) protein (572aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Acinetobacter sp. NIPH 236 RepID=N8QYT9_9GAMM
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:ENU28323.1}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB rbh
SCNpilot_cont_750_p_scaffold_3974_5
Acinetobacter tjernbergiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3476..4705
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Acinetobacter tjernbergiae DSM 14971 = CIP 107465 RepID=V2W7Z8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESK56144.1}; TaxID=1120928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter tjernbergiae DSM 14971 = CIP 107465.;"
pilC; type 4 fimbrial assembly protein; K02653 type IV pilus assembly protein PilC rbh
SCNpilot_cont_750_p_scaffold_3974_6
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4708..5568
DNA (861bp) protein (287aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
pilD; type IV pilus prepilin peptidase PilD; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] rbh
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Acinetobacter sp. NIPH 236 RepID=N8PPX8_9GAMM
SCNpilot_cont_750_p_scaffold_3974_7
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5570..6175
DNA (606bp) protein (202aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
coaE; dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24] rbh
Dephospho-CoA kinase n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9LR97_9GAMM
SCNpilot_cont_750_p_scaffold_3974_8
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6172..7083)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9LRH5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENW98828.1}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
hypothetical protein rbh
SCNpilot_cont_750_p_scaffold_3974_9
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7114..7863)
DNA (750bp) protein (250aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
rlmB; putative tRNA/rRNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] rbh
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Acinetobacter sp. NIPH 236 RepID=N8QYU3_9GAMM
SCNpilot_cont_750_p_scaffold_3974_10
Acinetobacter sp. NIPH 284, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7983..8309)
DNA (327bp) protein (109aa)
UPF0345 protein F992_00442 n=4 Tax=Acinetobacter RepID=N8R456_9GAMM
UPF0345 protein F908_02787 {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=1217704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 284.;"
hypothetical protein; K09913 hypothetical protein
SCNpilot_cont_750_p_scaffold_3974_11
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8652..10310
DNA (1659bp) protein (553aa)
DNA repair protein RecN n=1 Tax=Acinetobacter sp. NIPH 236 RepID=N8PPY3_9GAMM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
recombination and DNA repair protein; K03631 DNA repair protein RecN (Recombination protein N) rbh
SCNpilot_cont_750_p_scaffold_3974_12
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10426..10980
DNA (555bp) protein (185aa)
UPF0301 protein F992_00444 n=3 Tax=Acinetobacter RepID=N8PP45_9GAMM
UPF0301 protein F900_02920 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
putative transcriptional regulator; K07735 putative transcriptional regulator rbh
SCNpilot_cont_750_p_scaffold_3974_13
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10973..11317
DNA (345bp) protein (115aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Putative Holliday junction resolvase n=2 Tax=Acinetobacter RepID=N8R2G8_9GAMM
Displaying 15 items

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