ggKbase home page

SCNpilot_cont_750_p_scaffold_2259

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_2259_1
unknown

Not on your lists

comp(68..160)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_2259_2
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157..324)
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZG68_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ27099.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
SCNpilot_cont_750_p_scaffold_2259_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356..1879)
DNA (1524bp) protein (508aa)
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit N {ECO:0000255|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000255|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000255|HAMAP-Rule:MF_00445}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH-quinone oxidoreductase subunit N n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=NUON_NITMU
SCNpilot_cont_750_p_scaffold_2259_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1876..3378)
DNA (1503bp) protein (501aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] rbh
NADH dehydrogenase subunit M {ECO:0000313|EMBL:ABB74327.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABB74327.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH dehydrogenase subunit M n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA94_NITMU
SCNpilot_cont_750_p_scaffold_2259_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3375..5348)
DNA (1974bp) protein (658aa)
proton-translocating NADH-quinone oxidoreductase, chain L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] rbh
NADH dehydrogenase subunit L {ECO:0000313|EMBL:ABB74326.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABB74326.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH dehydrogenase subunit L n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA95_NITMU
SCNpilot_cont_750_p_scaffold_2259_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5350..5676)
DNA (327bp) protein (109aa)
NADH-ubiquinone oxidoreductase, chain 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K {ECO:0000255|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000255|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000255|HAMAP-Rule:MF_01456}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=UPI00005E6870
SCNpilot_cont_750_p_scaffold_2259_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5663..6199)
DNA (537bp) protein (179aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH dehydrogenase subunit J {ECO:0000313|EMBL:ABB74324.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABB74324.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH dehydrogenase subunit J n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA97_NITMU
SCNpilot_cont_750_p_scaffold_2259_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6235..6750)
DNA (516bp) protein (172aa)
NADH dehydrogenase subunit I (EC:1.6.5.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit I 1 {ECO:0000255|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I 1 {ECO:0000255|HAMAP-Rule:MF_01351}; NDH-1 subunit I 1 {ECO:0000255|HAMAP-Rule:MF_01351}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH-quinone oxidoreductase subunit I 1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=NUOI1_NITMU
SCNpilot_cont_750_p_scaffold_2259_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6778..7734)
DNA (957bp) protein (319aa)
NADH dehydrogenase subunit H (EC:1.6.5.3); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit H 1 {ECO:0000255|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H 1 {ECO:0000255|HAMAP-Rule:MF_01350}; NDH-1 subunit H 1 {ECO:0000255|HAMAP-Rule:MF_01350}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH-quinone oxidoreductase subunit H 1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=NUOH1_NITMU
SCNpilot_cont_750_p_scaffold_2259_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7731..10529)
DNA (2799bp) protein (933aa)
NADH dehydrogenase subunit G (EC:1.6.5.3); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] rbh
NADH dehydrogenase subunit G {ECO:0000313|EMBL:ABB74321.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABB74321.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH dehydrogenase subunit G n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAA0_NITMU
SCNpilot_cont_750_p_scaffold_2259_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10532..11803)
DNA (1272bp) protein (424aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] rbh
NADH dehydrogenase subunit F {ECO:0000313|EMBL:ABB74320.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABB74320.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH dehydrogenase subunit F n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAA1_NITMU
SCNpilot_cont_750_p_scaffold_2259_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11781..12314)
DNA (534bp) protein (178aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH dehydrogenase subunit E {ECO:0000313|EMBL:ABB74319.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABB74319.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH dehydrogenase subunit E n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAA2_NITMU
SCNpilot_cont_750_p_scaffold_2259_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12321..14102)
DNA (1782bp) protein (594aa)
bifunctional NADH:ubiquinone oxidoreductase subunit C/D (EC:1.6.99.5); K13378 NADH-quinone oxidoreductase subunit C/D [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit C/D {ECO:0000255|HAMAP-Rule:MF_01359}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01359};; NADH dehydrogenase I subunit C/D {ECO:0000255|HAMAP-Rule:MF_01359}; NDH-1 subunit C/D {ECO:0000255|HAMAP-Rule:MF_01359}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH-quinone oxidoreductase subunit C/D n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=NUOCD_NITMU
SCNpilot_cont_750_p_scaffold_2259_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14106..14789)
DNA (684bp) protein (228aa)
NADH dehydrogenase subunit B (EC:1.6.5.3); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit B 1 {ECO:0000255|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B 1 {ECO:0000255|HAMAP-Rule:MF_01356}; NDH-1 subunit B 1 {ECO:0000255|HAMAP-Rule:MF_01356}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH-quinone oxidoreductase subunit B 1 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=NUOB1_NITMU
SCNpilot_cont_750_p_scaffold_2259_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14774..15211)
DNA (438bp) protein (146aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A {ECO:0000255|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000255|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000255|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000255|HAMAP-Rule:MF_01394}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
NADH-quinone oxidoreductase subunit A n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=NUOA_NITMU
SCNpilot_cont_750_p_scaffold_2259_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15446..16156
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAA6_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74315.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_p_scaffold_2259_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16190..16963)
DNA (774bp) protein (258aa)
DnaJ-like protein DjlA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC3_9PROT
DnaJ-like protein DjlA {ECO:0000313|EMBL:CCU61781.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
djlA; Dna-J like membrane chaperone protein; K05801 DnaJ like chaperone protein rbh
SCNpilot_cont_750_p_scaffold_2259_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17210..17608
DNA (399bp) protein (133aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAM7_NITMU
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ABB74194.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying 18 items

View Taxonomy