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SCNpilot_cont_750_p_scaffold_2421

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_2421_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..167)
DNA (165bp) protein (55aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
dihydrodipicolinate reductase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000370CE01
SCNpilot_cont_750_p_scaffold_2421_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

204..668
DNA (465bp) protein (155aa)
PadR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI000348C192
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KJL36321.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
N-acetylglutamate synthase
SCNpilot_cont_750_p_scaffold_2421_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1275..2288)
DNA (1014bp) protein (338aa)
General stress protein 69 {ECO:0000313|EMBL:KJL36319.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL36319.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ECE566
oxidoreductase
SCNpilot_cont_750_p_scaffold_2421_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2485..4743)
DNA (2259bp) protein (753aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pnp; polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] rbh
polynucleotide phosphorylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371CC37
SCNpilot_cont_750_p_scaffold_2421_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5073..6461)
DNA (1389bp) protein (463aa)
Na+/H+-dicarboxylate symporters n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFD2_MICTS
Aerobic C4-dicarboxylate transport protein {ECO:0000313|EMBL:KJL36317.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Na+/H+-dicarboxylate symporters; K11103 aerobic C4-dicarboxylate transport protein rbh
SCNpilot_cont_750_p_scaffold_2421_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6607..7878
DNA (1272bp) protein (424aa)
Sensor protein CitS {ECO:0000313|EMBL:KJL36316.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL36316.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Putative signal transduction histidine kinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XKM1_9MICO
signal transduction histidine kinase regulating citrate/malate metabolism
SCNpilot_cont_750_p_scaffold_2421_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7875..8558
DNA (684bp) protein (228aa)
Transcriptional regulatory protein n=2 Tax=Microbacterium RepID=H8E289_9MICO
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
response regulator of citrate/malate metabolism
SCNpilot_cont_750_p_scaffold_2421_8
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8606..9823
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00036161FF
Uncharacterized protein {ECO:0000313|EMBL:EYT63831.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_2421_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9827..11800)
DNA (1974bp) protein (658aa)
GDP-mannose-dependent alpha-mannosyltransferase {ECO:0000313|EMBL:KJL44943.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJL44943.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
glycosyltransferase; K12583 phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] rbh
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ECEF6B
SCNpilot_cont_750_p_scaffold_2421_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11937..12566
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5ECA6
Uncharacterized protein {ECO:0000313|EMBL:KJL44944.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_2421_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12572..13036
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U685_MYXSD
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:KJL44945.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_2421_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13047..13691)
DNA (645bp) protein (215aa)
FMN reductase (NADPH) {ECO:0000313|EMBL:KJL44946.1}; EC=1.5.1.38 {ECO:0000313|EMBL:KJL44946.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
flavoprotein; K00299 FMN reductase [EC:1.5.1.38] rbh
NADPH-dependent FMN reductase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KUC8_9MICO
SCNpilot_cont_750_p_scaffold_2421_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13693..14928)
DNA (1236bp) protein (412aa)
Alkanal monooxygenase alpha chain {ECO:0000313|EMBL:KJL44947.1}; EC=1.14.14.3 {ECO:0000313|EMBL:KJL44947.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BE44_9MICO
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase rbh
SCNpilot_cont_750_p_scaffold_2421_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15004..15906)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003176E90
Putative aminoacrylate hydrolase RutD {ECO:0000313|EMBL:KJL44948.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_2421_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16025..17044
DNA (1020bp) protein (340aa)
Deacetoxycephalosporin C hydroxylase {ECO:0000313|EMBL:KJL44949.1}; EC=1.14.11.26 {ECO:0000313|EMBL:KJL44949.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Isopenicillin N synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA71_MICTS
isopenicillin N synthase; K06892 rbh
SCNpilot_cont_750_p_scaffold_2421_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17547..18851
DNA (1305bp) protein (435aa)
MFS transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI000344A60E
Enterobactin exporter EntS {ECO:0000313|EMBL:KJL44951.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily rbh
SCNpilot_cont_750_p_scaffold_2421_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18941..19906
DNA (966bp) protein (322aa)
membrane protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D76A08
Putative inner membrane transporter YedA {ECO:0000313|EMBL:KJL41394.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the drug/metabolite transporter (DMT) superfamily rbh
SCNpilot_cont_750_p_scaffold_2421_18
unknown

Not on your lists

comp(19806..20621)
DNA (816bp) protein (272aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_2421_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20652..21185)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003486D99
Protein YceI {ECO:0000313|EMBL:KJL41392.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
Displaying 19 items

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