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SCNpilot_cont_750_p_scaffold_1088

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_1088_1
unknown

Not on your lists

2..409
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1088_2

Not on your lists

722..994
DNA (273bp) protein (91aa)
Non-specific DNA-binding protein id=2555620 bin=GWC2_Alphaproteobacteria_42_16 species=Erythrobacter sp. SD-21 genus=Erythrobacter taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Histone-like protein {ECO:0000313|EMBL:EKE09138.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta
SCNpilot_cont_750_p_scaffold_1088_3
unknown

Not on your lists

1015..1452
DNA (438bp) protein (146aa)
ProP expression regulator n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B438
SCNpilot_cont_750_p_scaffold_1088_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1513..2169
DNA (657bp) protein (219aa)
id=2547281 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_750_p_scaffold_1088_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2161..9519)
DNA (7359bp) protein (2453aa)
Conjugal transfer relaxase TraA n=1 Tax=uncultured bacterium RepID=K2DX40_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL13943.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
traA; Ti-type conjugative transfer relaxase TraA
SCNpilot_cont_750_p_scaffold_1088_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9676..9954
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13755.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_cont_750_p_scaffold_1088_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9989..10297
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL13880.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_cont_750_p_scaffold_1088_8
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10396..10668
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B18E
Uncharacterized protein {ECO:0000313|EMBL:EQB00420.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1088_9
Gemmata sp. Wa1-1, Gemmata, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10933..12072)
DNA (1140bp) protein (380aa)
Putative regulatory subunit (Fragment) n=1 Tax=Gemmata sp. Wa1-1 RepID=Q5EUH2_9PLAN
Putative regulatory subunit {ECO:0000313|EMBL:AAX07510.1}; Flags: Fragment;; TaxID=235140 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gemmata.;" source="Gemmata sp. Wa1-1.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1088_10
unknown

Not on your lists

12309..12635
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1088_11

Not on your lists

13119..14555
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EL19_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10187.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ATPase family protein; K06921 rbh
SCNpilot_cont_750_p_scaffold_1088_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14747..15196)
DNA (450bp) protein (150aa)
hypothetical protein COdytL_11809 id=4908775 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_750_p_scaffold_1088_13

Not on your lists

15466..15918
DNA (453bp) protein (151aa)
Helix-turn-helix protein n=1 Tax=uncultured bacterium RepID=K2ELS5_9BACT
Helix-turn-helix protein {ECO:0000313|EMBL:EKE10507.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1088_14
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

15983..16612
DNA (630bp) protein (210aa)
endonuclease n=1 Tax=Diplorickettsia massiliensis RepID=UPI00029B02EE
nuclease
Tax=RifOxyB12_full_OP3_50_7_curated
SCNpilot_cont_750_p_scaffold_1088_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16627..17304)
DNA (678bp) protein (226aa)
id=4175661 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_750_p_scaffold_1088_16
R_Gammaproteobacteria_45_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17375..18868)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ETR4_9BACT
hypothetical protein; K06921 rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_9_curated
SCNpilot_cont_750_p_scaffold_1088_17

Not on your lists

19349..19777
DNA (429bp) protein (143aa)
Transcriptional regulator, ROS/MUCR family n=1 Tax=uncultured bacterium RepID=K2DW21_9BACT
Transcriptional regulator, ROS/MUCR family {ECO:0000313|EMBL:EKE09976.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative transcriptional regulator, Ros/MucR family
SCNpilot_cont_750_p_scaffold_1088_18
R_Gammaproteobacteria_45_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20057..21571)
DNA (1515bp) protein (505aa)
Putative uncharacterized protein id=3298369 bin=GWC2_Alphaproteobacteria_42_16 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K06921
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_9_curated
SCNpilot_cont_750_p_scaffold_1088_19
unknown

Not on your lists

comp(22440..22766)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1088_20

Not on your lists

23084..26590
DNA (3507bp) protein (1169aa)
Tetratricopeptide repeat protein n=1 Tax=uncultured bacterium RepID=K2EGT7_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKE09348.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1088_21
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

27389..27631
DNA (243bp) protein (81aa)
Glutaredoxin-like protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZM58_9PROT
Glutaredoxin 3 GrxA {ECO:0000313|EMBL:AHB89461.1}; TaxID=1394889 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus sp. NK55a.;"
glutaredoxin-like protein; K03676 glutaredoxin 3
SCNpilot_cont_750_p_scaffold_1088_22
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27654..28244)
DNA (591bp) protein (197aa)
Resolvase, N-terminal domain n=12 Tax=Proteobacteria RepID=A0R850_PELPD
DNA-invertase hin {ECO:0000313|EMBL:EXI77097.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
resolvase domain-containing protein
SCNpilot_cont_750_p_scaffold_1088_23
unknown

Not on your lists

comp(28201..28407)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_1088_24

Not on your lists

28581..28829
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXA9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10139.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_750_p_scaffold_1088_25

Not on your lists

28822..29208
DNA (387bp) protein (129aa)
PilT protein domain protein id=4019191 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Arthrospira taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
PilT protein {ECO:0000313|EMBL:EKE10140.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_1088_26
Dictyostelium purpureum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

29470..32247
DNA (2778bp) protein (926aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium purpureum RepID=F0ZHY3_DICPU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGC36449.1}; TaxID=5786 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium purpureum (Slime mold).;"
Displaying 26 items

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