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SCNpilot_cont_750_p_scaffold_562

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_562_trna_2
unknown

Not on your lists

comp(3..74)
DNA (72bp)
transferRNA
SCNpilot_cont_750_p_scaffold_562_1
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

265..540
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGQ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX74215.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_562_trna_1
unknown

Not on your lists

comp(641..711)
DNA (71bp)
transferRNA
SCNpilot_cont_750_p_scaffold_562_2
unknown

Not on your lists

comp(896..1108)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_562_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1587..2087
DNA (501bp) protein (167aa)
AsnC family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF90_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EHH09571.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
SCNpilot_cont_750_p_scaffold_562_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2121..3281
DNA (1161bp) protein (387aa)
Creatinase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF89_9RHIZ
Creatinase {ECO:0000313|EMBL:EHH09570.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Creatinase rbh
SCNpilot_cont_750_p_scaffold_562_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3334..4587
DNA (1254bp) protein (418aa)
Receptor family ligand binding region family protein 16 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF88_9RHIZ
Receptor family ligand binding region family protein 16 {ECO:0000313|EMBL:EHH09569.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative hydrophobic amino acid ABC transporter, substrate-binding component rbh
SCNpilot_cont_750_p_scaffold_562_6
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4630..5514
DNA (885bp) protein (295aa)
Hydrophobic amino acid ABC transporter permease n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF87_9RHIZ
Hydrophobic amino acid ABC transporter permease {ECO:0000313|EMBL:EHH09568.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative hydrophobic amino acid ABC transporter, permease component rbh
SCNpilot_cont_750_p_scaffold_562_7
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5518..6387
DNA (870bp) protein (290aa)
ABC transporter permease n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF86_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:EHH09567.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative hydrophobic amino acid ABC transporter, permease component rbh
SCNpilot_cont_750_p_scaffold_562_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6384..7151
DNA (768bp) protein (256aa)
Amino acid transport ATP-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF85_9RHIZ
Amino acid transport ATP-binding protein {ECO:0000313|EMBL:EHH09566.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative hydrophobic amino acid ABC transporter, ATP-binding component rbh
SCNpilot_cont_750_p_scaffold_562_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7148..7885
DNA (738bp) protein (246aa)
ATP-binding protein of branched-chain amino acid ABC transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF84_9RHIZ
ATP-binding protein of branched-chain amino acid ABC transporter {ECO:0000313|EMBL:EHH09565.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative hydrophobic amino acid ABC transporter, ATP-binding component rbh
SCNpilot_cont_750_p_scaffold_562_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8050..10305)
DNA (2256bp) protein (752aa)
FO synthase FbiC {ECO:0000313|EMBL:AEI07642.1}; EC=2.5.1.- {ECO:0000313|EMBL:AEI07642.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
fbiC; FO synthase (EC:2.5.1.-); K11779 FO synthase [EC:2.5.1.-]
FO synthase n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBS6_OLICO
SCNpilot_cont_750_p_scaffold_562_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10377..11048)
DNA (672bp) protein (224aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
2-phospho-L-lactate guanylyltransferase CofC; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68]
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MU13_9RHIZ
SCNpilot_cont_750_p_scaffold_562_12
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11045..12004)
DNA (960bp) protein (320aa)
cofD; LPPG:FO 2-phospho-L-lactate transferase; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FSS2_RHIML
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:EHK80022.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
SCNpilot_cont_750_p_scaffold_562_13
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12001..12768)
DNA (768bp) protein (256aa)
cofE; F420-0:gamma-glutamyl ligase CofE (EC:6.3.2.-); K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
Oxidoreductase n=1 Tax=Ralstonia sp. PBA RepID=I9W1D3_9RALS
Oxidoreductase {ECO:0000313|EMBL:EIZ02232.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
SCNpilot_cont_750_p_scaffold_562_14
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12783..13430)
DNA (648bp) protein (216aa)
NADPH-dependent F420 reductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1S7_STAND
NADPH-dependent F420 reductase; K06988
NADPH-dependent F420 reductase {ECO:0000313|EMBL:ADH91502.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_p_scaffold_562_15
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13430..17239)
DNA (3810bp) protein (1270aa)
hydantoinase/oxoprolinase; K01469 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] rbh
Hydantoinase/oxoprolinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LC3_MESSB
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:ABG61802.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_p_scaffold_562_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17598..18140
DNA (543bp) protein (181aa)
(2Fe-2S)-binding protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein id=3884861 bin=GWF2_Syntrophobacterales_56_9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_750_p_scaffold_562_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18131..20461
DNA (2331bp) protein (777aa)
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein id=14628981 bin=bin8_Chloro species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_750_p_scaffold_562_18
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20583..22217
DNA (1635bp) protein (545aa)
Extracellular solute-binding protein family 5 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IB49_METNO
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACL55442.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_p_scaffold_562_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22229..23170
DNA (942bp) protein (314aa)
peptide ABC transporter n=1 Tax=Methylobacterium sp. 77 RepID=UPI00037F8C08
binding-protein-dependent transporter inner membrane component; K02033 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU43008.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_750_p_scaffold_562_20
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23182..24036
DNA (855bp) protein (285aa)
ABC transporter permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2K497_9PROT
ABC transporter permease {ECO:0000313|EMBL:EKE77754.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_750_p_scaffold_562_21
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24036..25661
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00035CA970
ABC transporter-like protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:ACL55445.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_p_scaffold_562_22
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25750..26670
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00036CC4F7
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EMS41477.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
LysR family transcriptional regulator
SCNpilot_cont_750_p_scaffold_562_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

26828..27853
DNA (1026bp) protein (342aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11); K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11]
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VP18_9EURY
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_750_p_scaffold_562_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27864..28787
DNA (924bp) protein (308aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTQ8_PSEUX
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_750_p_scaffold_562_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

28787..29101
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_750_p_scaffold_562_26
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29603..30514
DNA (912bp) protein (304aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
FAD dependent oxidoreductase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSX9_PUSST
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEC20902.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_750_p_scaffold_562_27
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30586..31167
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000373B47D
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EPE95326.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_750_p_scaffold_562_28
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31241..31741)
DNA (501bp) protein (167aa)
Transcriptional regulator, MarR family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSZ3_GRABC
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABI62059.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Displaying items 1-30 of 54 in total

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