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SCNpilot_cont_750_p_scaffold_516

Search features with annotation key words

Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_516_1
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..683)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PRK9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ89969.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
SCNpilot_cont_750_p_scaffold_516_2
unknown

Not on your lists

comp(900..1877)
DNA (978bp) protein (326aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_516_3
unknown

Not on your lists

comp(1908..2657)
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_516_4
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2821..3612
DNA (792bp) protein (264aa)
Resolvase, N-terminal domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGI0_9PROT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFH13594.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
resolvase
SCNpilot_cont_750_p_scaffold_516_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3609..3914
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003655836
Uncharacterized protein {ECO:0000313|EMBL:EFH13595.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_516_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3853..4377
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9R9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59768.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_516_7
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4386..5300)
DNA (915bp) protein (305aa)
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037CE819
Putative transcriptional regulatory protein,LysR family OprD regulatory protein {ECO:0000313|EMBL:CCV12861.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transcriptional regulator
SCNpilot_cont_750_p_scaffold_516_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5391..5780
DNA (390bp) protein (130aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y9B2_MESOW
Uncharacterized protein {ECO:0000313|EMBL:KFC75974.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Cupin 2 barrel domain-containing protein
SCNpilot_cont_750_p_scaffold_516_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5807..6547
DNA (741bp) protein (247aa)
Short-chain alcohol dehydrogenase n=1 Tax=Rhizobium sp. CF142 RepID=J1TCV7_9RHIZ
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:EJJ29626.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_750_p_scaffold_516_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6547..7851
DNA (1305bp) protein (435aa)
Drug transporter protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JN00_AGRRK
drug transporter protein; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein rbh
MFS transporter {ECO:0000313|EMBL:KEA03545.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_750_p_scaffold_516_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8195..10180
DNA (1986bp) protein (662aa)
Conjugal transfer coupling protein TraG n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9G7_9RHIZ
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAN75817.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
conjugal transfer coupling protein TraG
SCNpilot_cont_750_p_scaffold_516_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10186..10620
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V508_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFI53038.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_750_p_scaffold_516_13
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10824..13268)
DNA (2445bp) protein (815aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2W5_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ79754.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_p_scaffold_516_14
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13455..13697
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2W4_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ79753.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_p_scaffold_516_15
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13694..14119
DNA (426bp) protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Ribonuclease VapC n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2W3_ACIMA
hypothetical protein
SCNpilot_cont_750_p_scaffold_516_16
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14601..16370
DNA (1770bp) protein (590aa)
Deoxycytidylate deaminase-like protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HHE4_RHIRD
Deoxycytidylate deaminase {ECO:0000313|EMBL:KJF71410.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
deoxycytidylate deaminase-like protein rbh
SCNpilot_cont_750_p_scaffold_516_17
unknown

Not on your lists

comp(16345..16602)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_516_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17012..17170
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN78427.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_p_scaffold_516_19
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17177..18232
DNA (1056bp) protein (352aa)
putative amine oxidase; K00274 monoamine oxidase [EC:1.4.3.4] rbh
Putative amine oxidase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0M5_ACIMA
Putative amine oxidase {ECO:0000313|EMBL:BAJ81561.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_p_scaffold_516_20
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18257..18619)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMS2_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54060.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_p_scaffold_516_21
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18631..19095)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMS3_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54061.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_p_scaffold_516_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19170..19757)
DNA (588bp) protein (196aa)
ParB domain protein nuclease n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NSS2_AZOS1
parB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family
ParB domain protein nuclease {ECO:0000313|EMBL:BAI71451.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_750_p_scaffold_516_23
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20347..21249)
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003657E0F
Putative HTH-type transcriptional regulator YcaN {ECO:0000313|EMBL:CDN52566.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_750_p_scaffold_516_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21342..22238
DNA (897bp) protein (299aa)
Aldo/keto reductase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4Q7_VARPE
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ADU36993.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_750_p_scaffold_516_25
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22086..23534)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2V1_ACIMA
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ79740.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_p_scaffold_516_26
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23547..24221)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2V0_ACIMA
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ79739.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_p_scaffold_516_27
unknown

Not on your lists

comp(25478..28405)
DNA (2928bp) protein (976aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_516_28
unknown

Not on your lists

comp(28405..29085)
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_516_29
unknown

Not on your lists

comp(29180..29296)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_516_30
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29573..30709)
DNA (1137bp) protein (379aa)
Transcriptional regulator, LuxR family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4K0_9SPHN
Transcriptional regulator, LuxR family protein
Transcriptional regulator, LuxR family protein {ECO:0000313|EMBL:AGH49409.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Displaying items 1-30 of 60 in total

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