ggKbase home page

SCNpilot_cont_750_p_scaffold_628

Search features with annotation key words

Displaying items 1-30 of 42 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_628_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1450)
DNA (1449bp) protein (483aa)
agaG; AgaG protein; K01474 N-methylhydantoinase B [EC:3.5.2.14]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EBF912
Methylhydantoinase {ECO:0000313|EMBL:KGM31366.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_750_p_scaffold_628_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1447..3501)
DNA (2055bp) protein (685aa)
agaF; AgaF protein; K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000364EBCD
Methylhydantoinase {ECO:0000313|EMBL:KJB95676.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_cont_750_p_scaffold_628_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3721..5058
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E6739F
D-amino acid oxidase {ECO:0000313|EMBL:EWY40999.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
oxidoreductase rbh
SCNpilot_cont_750_p_scaffold_628_4
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5055..6611)
DNA (1557bp) protein (519aa)
Methyltransferase type 12 n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WTZ4_HALHL
type 12 methyltransferase rbh
Methyltransferase type 12 {ECO:0000313|EMBL:ABM61156.1}; TaxID=349124 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira; halophila (strain DSM 244 / SL1)).;"
SCNpilot_cont_750_p_scaffold_628_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6646..8178)
DNA (1533bp) protein (511aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVE5_9PROT
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:KFC70949.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
twin-arginine translocation pathway signal; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_628_6
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8232..9659)
DNA (1428bp) protein (476aa)
TPR repeat protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8ICN1_AZOC5
hypothetical protein rbh
TPR repeat protein {ECO:0000313|EMBL:BAF89229.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_p_scaffold_628_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9760..11232
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZU8_9PROT
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
microcystin LR degradation protein MlrC-like protein rbh
SCNpilot_cont_750_p_scaffold_628_8
unknown

Not on your lists

11441..11929
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_628_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11936..12700)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003774583
Uncharacterized protein {ECO:0000313|EMBL:EIK88927.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_628_10
unknown

Not on your lists

comp(12763..12972)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_628_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13275..15299
DNA (2025bp) protein (675aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037C2C5A
Uncharacterized protein {ECO:0000313|EMBL:KJB94374.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
transcriptional activator domain-containing protein
SCNpilot_cont_750_p_scaffold_628_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15417..17027
DNA (1611bp) protein (537aa)
betA2; choline dehydrogenase BetA (EC:1.1.99.1)
Choline dehydrogenase-like flavoprotein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YF48_9BRAD
Choline dehydrogenase {ECO:0000313|EMBL:KJC61544.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCNpilot_cont_750_p_scaffold_628_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17135..18673)
DNA (1539bp) protein (513aa)
Sulfatase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRT8_9PROT
Sulfatase {ECO:0000313|EMBL:EKE72976.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
sulfatase
SCNpilot_cont_750_p_scaffold_628_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18745..19320
DNA (576bp) protein (192aa)
HD phosphohydrolase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SH55_9BURK
HD phosphohydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_750_p_scaffold_628_15
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19396..20073
DNA (678bp) protein (226aa)
Class I glutamine amidotransferase {ECO:0000313|EMBL:EFH12160.1}; EC=6.3.5.2 {ECO:0000313|EMBL:EFH12160.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Class I glutamine amidotransferase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKK7_9PROT
glutamine amidotransferase
SCNpilot_cont_750_p_scaffold_628_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20105..21184
DNA (1080bp) protein (360aa)
polyamine ABC transporter substrate-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI000365F64A
ABC opine/polyamine transporter, periplasmic binding protein {ECO:0000313|EMBL:EHK54260.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
opine/polyamine ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
SCNpilot_cont_750_p_scaffold_628_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21195..22292
DNA (1098bp) protein (366aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Spermidine/putrescine ABC transporter ATP-binding subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQV9_9RHIZ
opine/polyamine ABC transporter ATPase; K02052 putative spermidine/putrescine transport system ATP-binding protein rbh
SCNpilot_cont_750_p_scaffold_628_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22295..23128
DNA (834bp) protein (278aa)
ABC-type spermidine/putrescine transport system, permease component I n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQW0_9RHIZ
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:EIM26352.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
opine/polyamine ABC transporter inner membrane subunit 2; K02054 putative spermidine/putrescine transport system permease protein
SCNpilot_cont_750_p_scaffold_628_19
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23134..23916
DNA (783bp) protein (261aa)
Putative Spermidine/putrescine ABC transpoter (Permease protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVW5_AZOBR
putative Spermidine/putrescine ABC transpoter (permease protein) rbh
Putative Spermidine/putrescine ABC transpoter (Permease protein) {ECO:0000313|EMBL:CCD02074.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_750_p_scaffold_628_20
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23946..24623
DNA (678bp) protein (226aa)
Demethylmenaquinone methyltransferase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y6G6_RAMTT
demethylmenaquinone methyltransferase
Demethylmenaquinone methyltransferase-like protein {ECO:0000313|EMBL:AEG94040.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_cont_750_p_scaffold_628_21
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24801..25232)
DNA (432bp) protein (144aa)
Peroxiredoxin osmC n=1 Tax=Azospirillum amazonense Y2 RepID=G1XY54_9PROT
Peroxiredoxin osmC {ECO:0000313|EMBL:EGY01803.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
OsmC family protein; K04063 osmotically inducible protein OsmC
SCNpilot_cont_750_p_scaffold_628_22
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25504..27678
DNA (2175bp) protein (725aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
Putative serine/threonine protein kinase (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXM3_9PROT
Putative serine/threonine protein kinase {ECO:0000313|EMBL:EKM99733.1}; Flags: Fragment;; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
SCNpilot_cont_750_p_scaffold_628_23
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27697..28863)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036F0F14
Uncharacterized protein {ECO:0000313|EMBL:EKM99750.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_628_24
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28923..29573)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000366BD91
hypothetical protein
OmpA/MotB domain-containing protein {ECO:0000313|EMBL:KDM68085.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCNpilot_cont_750_p_scaffold_628_25
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29737..31245)
DNA (1509bp) protein (503aa)
Methyltransferase type 12 n=3 Tax=Acidiphilium RepID=A5G334_ACICJ
hypothetical protein rbh
Methyltransferase type 12 {ECO:0000313|EMBL:ABQ32266.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_750_p_scaffold_628_26
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31259..32311)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5G333_ACICJ
hypothetical protein; K11895 type VI secretion system protein ImpH rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ32265.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_750_p_scaffold_628_27
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32337..34160)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YYA6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM99747.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein; K11896 type VI secretion system protein ImpG rbh
SCNpilot_cont_750_p_scaffold_628_28
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34181..34738)
DNA (558bp) protein (186aa)
GPW/gp25 family protein n=3 Tax=Acidiphilium RepID=A5G331_ACICJ
type VI secretion system family protein; K11897 type VI secretion system protein ImpF
GPW/gp25 family protein {ECO:0000313|EMBL:ABQ32263.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_750_p_scaffold_628_29
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34758..35573)
DNA (816bp) protein (272aa)
Virulence protein, SciE type n=2 Tax=Acidiphilium RepID=A5G330_ACICJ
ImpE family protein; K11898 type VI secretion system protein ImpE rbh
ImpE family protein {ECO:0000313|EMBL:BAJ82766.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_p_scaffold_628_30
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35676..37247)
DNA (1572bp) protein (524aa)
Type VI secretion system family protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XSZ4_9PROT
Type VI secretion system family protein {ECO:0000313|EMBL:EKM99744.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein; K11900 type VI secretion system protein ImpC rbh
Displaying items 1-30 of 42 in total

View Taxonomy