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SCNpilot_cont_750_p_scaffold_3693

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_3693_1

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276..1442
DNA (1167bp) protein (389aa)
NnrS protein involved in response to NO n=1 Tax=Rhodovulum sp. PH10 RepID=J6JCX6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN71008.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K07234 uncharacterized protein involved in response to NO
SCNpilot_cont_750_p_scaffold_3693_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1479..2177)
DNA (699bp) protein (233aa)
cyclic nucleotide-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B49B3A
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EFI52471.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
nnrR; Nitrite and nitric oxide reductase transcriptional regulator (Crp/Fnr family)
SCNpilot_cont_750_p_scaffold_3693_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2416..3072
DNA (657bp) protein (219aa)
alternative oxidase 1 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B628DB
Alternative oxidase {ECO:0000313|EMBL:CEG07034.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
oxidase
SCNpilot_cont_750_p_scaffold_3693_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3226..3720
DNA (495bp) protein (165aa)
Pseudoazurin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D9_9BRAD
Blue copper protein {ECO:0000313|EMBL:CEG07035.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
pseudoazurin
SCNpilot_cont_750_p_scaffold_3693_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3707..4156
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07039.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_750_p_scaffold_3693_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4149..4424
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07040.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3693_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4656..6317
DNA (1662bp) protein (554aa)
ccoN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09188.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_750_p_scaffold_3693_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6323..7060
DNA (738bp) protein (246aa)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S7_9BRAD
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EFI51287.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ccoO2; cbb3-type cytochrome oxidase, subunit CcoO; K00405 cytochrome c oxidase cbb3-type subunit II rbh
SCNpilot_cont_750_p_scaffold_3693_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7057..7230
DNA (174bp) protein (58aa)
Cbb3-type cytochrome oxidase, subunit CcoQ n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3B3_9RHIZ
cbb3-type cytochrome oxidase, subunit CcoQ
Cbb3-type cytochrome oxidase, subunit CcoQ {ECO:0000313|EMBL:AGK56707.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_p_scaffold_3693_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7240..8118
DNA (879bp) protein (293aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NV23_AFIFE
ccoP2; cbb3-type cytochrome oxidase, subunit CcoP; K00406 cytochrome c oxidase cbb3-type subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_750_p_scaffold_3693_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8115..8318
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS56_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31269.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_3693_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8351..9157
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYM8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31268.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative cytochrome c oxidase subunit I
SCNpilot_cont_750_p_scaffold_3693_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9209..11488
DNA (2280bp) protein (760aa)
fixI; nitrogen fixation protein FixI (EC:3.6.3.-)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S2_9BRAD
Copper-exporting P-type ATPase A {ECO:0000313|EMBL:CEG09194.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_750_p_scaffold_3693_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11485..11664
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037DC25A
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:EKS31267.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ccoS; cytochrome oxidase maturation protein, Cbb3-type
Displaying 14 items

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