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SCNpilot_cont_750_p_scaffold_2983

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_2983_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..180)
DNA (180bp) protein (60aa)
Transcriptional regulator, TetR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB6_NITHX
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABE61931.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_p_scaffold_2983_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(201..3347)
DNA (3147bp) protein (1049aa)
Acriflavin resistance protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB7_NITHX
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABE61930.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_p_scaffold_2983_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3385..4509)
DNA (1125bp) protein (375aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPB8_NITHX
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABE61929.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_p_scaffold_2983_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4675..6033)
DNA (1359bp) protein (453aa)
MFS permease n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8I5_BRAJP
MFS permease rbh
MFS permease {ECO:0000313|EMBL:BAL12664.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_p_scaffold_2983_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6368..6583
DNA (216bp) protein (72aa)
CsbD-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219M1_RHOPB
CsbD-like protein
CsbD-like {ECO:0000313|EMBL:ABD86915.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_p_scaffold_2983_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6822..8357)
DNA (1536bp) protein (512aa)
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase {ECO:0000313|EMBL:ABD86914.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABD86914.1};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Gamma-glutamyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219M2_RHOPB
SCNpilot_cont_750_p_scaffold_2983_7
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8567..9328
DNA (762bp) protein (254aa)
UPF0176 protein BBta_2196 n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EDY4_BRASB
hypothetical protein; K07146 UPF0176 protein rbh
UPF0176 protein BBta_2196 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_p_scaffold_2983_8
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9325..9543
DNA (219bp) protein (73aa)
Protein SlyX homolog n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IQN8_9BRAD
Protein SlyX homolog {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein; K03745 SlyX protein
SCNpilot_cont_750_p_scaffold_2983_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9830..10909
DNA (1080bp) protein (360aa)
glycine oxidase ThiO; K03153 glycine oxidase [EC:1.4.3.19]
Glycine oxidase {ECO:0000313|EMBL:ABE63659.1}; EC=1.4.3.19 {ECO:0000313|EMBL:ABE63659.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Glycine oxidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJD8_NITHX
SCNpilot_cont_750_p_scaffold_2983_10
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10900..11097
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z3I1_9BRAD
thiS; thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:BAM87913.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_750_p_scaffold_2983_11
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11281..12069
DNA (789bp) protein (263aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
thiazole synthase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D595C0
thiazole synthase
SCNpilot_cont_750_p_scaffold_2983_12
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12056..12664
DNA (609bp) protein (203aa)
Thiamine-phosphate synthase {ECO:0000256|RuleBase:RU003826}; EC=2.5.1.3 {ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|RuleBase:RU003826}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
thiamine-phosphate pyrophosphorylase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] rbh
Thiamine-phosphate synthase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VQ26_9BRAD
SCNpilot_cont_750_p_scaffold_2983_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12674..13060
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJD4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63663.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_p_scaffold_2983_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13135..14049
DNA (915bp) protein (305aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Phosphomethylpyrimidine synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=THIC_RHOPB
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
Displaying 14 items

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