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SCNpilot_cont_750_p_scaffold_2400_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_2400_curated_1
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(80..955)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N8PQ10_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENU28360.1}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_2400_curated_2
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1070..1561
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N8PP74_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENU28361.1}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_2400_curated_3
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1620..1979)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N8R2K4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENU28362.1}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_2400_curated_4
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2235..3086
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3862 RepID=N9LRE2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENW98867.1}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
esterase/lipase-like protein
SCNpilot_cont_750_p_scaffold_2400_curated_5
Acinetobacter sp. NIPH 284, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3190..3405)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1217704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 284.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acinetobacter sp. NIPH 284 RepID=N9K5V2_9GAMM
SCNpilot_cont_750_p_scaffold_2400_curated_6
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7537..11625)
DNA (4089bp) protein (1363aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=5 Tax=Acinetobacter RepID=N8PQ16_9GAMM
SCNpilot_cont_750_p_scaffold_2400_curated_7
Acinetobacter parvus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11935..12303)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=9 Tax=Acinetobacter RepID=N8PP79_9GAMM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1217671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter parvus NIPH 1103.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
SCNpilot_cont_750_p_scaffold_2400_curated_8
Acinetobacter sp. NIPH 284, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12346..12852)
DNA (507bp) protein (169aa)
50S ribosomal protein L10 n=1 Tax=Acinetobacter sp. NIPH 284 RepID=N9LLD2_9GAMM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1217704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 284.;"
Ribosomal protein L10
SCNpilot_cont_750_p_scaffold_2400_curated_9
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13099..13371)
DNA (273bp) protein (91aa)
50S ribosomal protein L1 n=2 Tax=Acinetobacter RepID=N8QYY0_9GAMM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
SCNpilot_cont_750_p_scaffold_2400_curated_10
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13798..14226)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=55 Tax=Acinetobacter RepID=RL11_ACIAD
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1310800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 1000160.;"
SCNpilot_cont_750_p_scaffold_2400_curated_11
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14340..14873)
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=3 Tax=Acinetobacter RepID=N8PQ21_9GAMM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
nusG; transcription antiterminator; K02601 transcriptional antiterminator NusG
SCNpilot_cont_750_p_scaffold_2400_curated_12
Acinetobacter sp. NIPH 236, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14881..15321)
DNA (441bp) protein (147aa)
Protein translocase subunit SecE n=2 Tax=Acinetobacter RepID=N8PP84_9GAMM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1217711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 236.;"
Preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
SCNpilot_cont_750_p_scaffold_2400_curated_trna_1
unknown

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comp(15401..15473)
DNA (73bp)
transferRNA
SCNpilot_cont_750_p_scaffold_2400_curated_13
Acinetobacter sp. ANC 3862, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15528..16589)
DNA (1062bp) protein (354aa)
Elongation factor Tu n=2 Tax=Acinetobacter RepID=N8QX39_9GAMM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1217705 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. ANC 3862.;"
elongation factor Tu; K02358 elongation factor Tu
Displaying 14 items

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