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SCNpilot_cont_750_p_scaffold_235_curated

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Displaying items 1-30 of 110 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_p_scaffold_235_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156..740)
DNA (585bp) protein (195aa)
UPF0301 protein TH2_04378 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LGS8_9PROT
UPF0301 protein IM40_00435 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_235_curated_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

775..2571
DNA (1797bp) protein (599aa)
COG4232: Thiol:disulfide interchange protein id=2744876 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Endolissoclinum faulkneri genus=Candidatus Endolissoclinum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative Thiol:disulfide interchange protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_750_p_scaffold_235_curated_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2628..2852
DNA (225bp) protein (75aa)
50S ribosomal protein L31 n=2 Tax=Phaeospirillum RepID=H8FQH2_PHAMO
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_cont_750_p_scaffold_235_curated_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2922..3857)
DNA (936bp) protein (312aa)
fbaB; Fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FGF8_9BACT
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AIL12332.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_cont_750_p_scaffold_235_curated_trna_2
unknown

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comp(3886..3959)
DNA (74bp)
transferRNA
SCNpilot_cont_750_p_scaffold_235_curated_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4150..5451
DNA (1302bp) protein (434aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U5W2_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AIL12334.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
aromatic hydrocarbon degradation membrane protein
SCNpilot_cont_750_p_scaffold_235_curated_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5565..7268
DNA (1704bp) protein (568aa)
lcfA; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225AF33
AMP-dependent synthetase {ECO:0000313|EMBL:AIL12335.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_cont_750_p_scaffold_235_curated_7
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7290..8432
DNA (1143bp) protein (381aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AIL12336.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AIL12336.1};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
acetyl-CoA acetyltransferase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1CD
SCNpilot_cont_750_p_scaffold_235_curated_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8429..10753
DNA (2325bp) protein (775aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1CE
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AIL12337.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_cont_750_p_scaffold_235_curated_9
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10757..12550
DNA (1794bp) protein (598aa)
acyl-CoA dehydrogenase n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1CF
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AIL12338.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_cont_750_p_scaffold_235_curated_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12592..13116
DNA (525bp) protein (175aa)
thioesterase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B5B33E
Uncharacterized protein {ECO:0000313|EMBL:AIL12339.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_235_curated_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13121..13942
DNA (822bp) protein (274aa)
Short-chain dehydrogenase {ECO:0000313|EMBL:AIL12340.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Oxidoreductase, short chain dehydrogenase id=4679829 bin=GWC2_Proteo_65_14_Ab886 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
short chain dehydrogenase; K13775 citronellol/citronellal dehydrogenase
SCNpilot_cont_750_p_scaffold_235_curated_12
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13959..15965)
DNA (2007bp) protein (669aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DNA topoisomerase 4 subunit B n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y404_9PROT
parE; DNA topoisomerase IV, subunit B
SCNpilot_cont_750_p_scaffold_235_curated_13
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16018..16221
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12343.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_cont_750_p_scaffold_235_curated_14
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16221..16781
DNA (561bp) protein (187aa)
Cob(I)alamin adenosyltransferase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KTT9_9PROT
Cob(I)yrinic acid a c-diamide adenosyltransferase {ECO:0000313|EMBL:AIL12344.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
meaD; ATP:cob(I)alamin adenosyltransferase involved in cofactor biosynthesis for adenosylcobalamin-dependent methylmalonyl-CoA mutase
SCNpilot_cont_750_p_scaffold_235_curated_15
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16809..17354)
DNA (546bp) protein (182aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ubiquinone biosynthesis protein COQ7; K06134 ubiquinone biosynthesis monooxygenase Coq7 [EC:1.14.13.-]
ubiquinone biosynthesis protein UbiB n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B7946E
SCNpilot_cont_750_p_scaffold_235_curated_16
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17351..17857)
DNA (507bp) protein (169aa)
disulfide bond formation protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B45E2D
disulfide bond formation DsbB family protein
Tax=CG_Alphaprot_01
SCNpilot_cont_750_p_scaffold_235_curated_17
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17893..18474)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12346.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DedA family gene id=4468879 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
SCNpilot_cont_750_p_scaffold_235_curated_trna_1
unknown

Not on your lists

18630..18713
DNA (84bp)
transferRNA
SCNpilot_cont_750_p_scaffold_235_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18751..19347
DNA (597bp) protein (199aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" sour
deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16D01_ROSDO
SCNpilot_cont_750_p_scaffold_235_curated_19
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19344..20516
DNA (1173bp) protein (391aa)
putative oxygen-independent coproporphyrinogen III oxidase (HemN-like); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Putative oxygen-independent coproporphyrinogen III oxidase (HemN-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6Y1_AZOL4
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:AIL12350.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_cont_750_p_scaffold_235_curated_20
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20513..21193)
DNA (681bp) protein (227aa)
DNA repair protein radc n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNV7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AIL12351.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DNA repair protein RadC; K03630 DNA repair protein RadC
SCNpilot_cont_750_p_scaffold_235_curated_21
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21268..22950
DNA (1683bp) protein (561aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=uncultured bacterium RepID=K2DV14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIL12352.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_cont_750_p_scaffold_235_curated_22
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23055..23801
DNA (747bp) protein (249aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Cytochrome c oxidase subunit 2 n=1 Tax=Oceanibaculum indicum P24 RepID=K2KEP6_9PROT
coxB; cytochrome c oxidase, subunit II
SCNpilot_cont_750_p_scaffold_235_curated_23
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25401..26309
DNA (909bp) protein (303aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
protoheme IX farnesyltransferase (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BSW4_PUNMI
SCNpilot_cont_750_p_scaffold_235_curated_24
unknown

Not on your lists

26306..26437
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_cont_750_p_scaffold_235_curated_25
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26438..27013
DNA (576bp) protein (192aa)
Cytochrome c oxidase assembly protein CtaG n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AN26_AZOBR
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
coxG; cytochrome c oxidase assembly protein
SCNpilot_cont_750_p_scaffold_235_curated_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27409..27774)
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12356.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_cont_750_p_scaffold_235_curated_27
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28279..30357
DNA (2079bp) protein (693aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Oceanibaculum indicum P24 RepID=K2KK41_9PROT
SCNpilot_cont_750_p_scaffold_235_curated_28
unknown

Not on your lists

30520..31659
DNA (1140bp) protein (380aa)

This feature has no annotations

Displaying items 1-30 of 110 in total

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