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SCNpilot_expt_1000_bf_scaffold_619

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_619_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

209..1555
DNA (1347bp) protein (449aa)
Integrase family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Z9_NIAKG rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:AEW02371.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_619_2
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1717..2694
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036B8AAD
Putative Transcriptional regulator, AraC family {ECO:0000313|EMBL:CEN44923.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_619_3
Lactobacillus plantarum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3013..4020
DNA (1008bp) protein (336aa)
AraC family transcriptional regulator n=1 Tax=Lactobacillus plantarum 4_3 RepID=V8RLM3_LACPN
AraC family transcriptional regulator {ECO:0000313|EMBL:EQM53897.1}; TaxID=1382301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus plantarum EGD-AQ4.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_619_4
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4595..5056
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXG7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ30159.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_619_5
unknown

Not on your lists

5168..5545
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_619_6
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5609..6949)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C3627
Uncharacterized protein {ECO:0000313|EMBL:AIM37244.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_619_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6979..10236)
DNA (3258bp) protein (1086aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000371EE40
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ25091.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_619_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10241..11524)
DNA (1284bp) protein (428aa)
Redoxin domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBL9_9SPHI
Redoxin domain protein {ECO:0000313|EMBL:EHQ25090.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein (DUF3738)/Redoxin
SCNpilot_expt_1000_bf_scaffold_619_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12260..12661
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PN46_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60480.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_619_10
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12688..13860
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LAG8_9CYAN rbh
Old {ECO:0000313|EMBL:KEI68990.1}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_619_11
Alloprevotella tannerae, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13871..14320
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LDC1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEX72874.1}; TaxID=626522 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Prevotella tannerae ATCC 51259.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_619_12
unknown

Not on your lists

comp(14749..15177)
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_619_13
unknown

Not on your lists

comp(15196..15705)
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_619_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15755..17116)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S752_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:KIC94667.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_619_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17146..19929)
DNA (2784bp) protein (928aa)
TonB-dependent receptor n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S751_PEDSD
TonB-dependent receptor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_619_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20140..20469
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC50_NIAKG
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEW00357.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_619_17
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20609..22270
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003657BAC
Nucleotide pyrophosphatase {ECO:0000313|EMBL:AKD05537.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
putative AP superfamily protein
SCNpilot_expt_1000_bf_scaffold_619_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22277..23050
DNA (774bp) protein (258aa)
Metallophosphoesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC53_NIAKG
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEW00360.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_619_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23062..23802
DNA (741bp) protein (247aa)
Metallophosphoesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC53_NIAKG
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEW00360.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_619_20
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23878..24921)
DNA (1044bp) protein (348aa)
Arsenical-resistance protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0E4_9FLAO
Arsenic resistance protein ArsB {ECO:0000313|EMBL:KIA82925.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
SCNpilot_expt_1000_bf_scaffold_619_21
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24924..25535)
DNA (612bp) protein (204aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1]
Protein-tyrosine-phosphatase n=1 Tax=Flavobacterium sp. CF136 RepID=J3BWM0_9FLAO
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:EJL59229.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
SCNpilot_expt_1000_bf_scaffold_619_22
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25552..26022)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037F54F9
Uncharacterized protein {ECO:0000313|EMBL:CEJ72010.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_619_23
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26079..26393)
DNA (315bp) protein (105aa)
Putative transcriptional regulator n=1 Tax=Flavobacterium sp. CF136 RepID=J3BVX6_9FLAO
Strain DSM 12611 Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51709.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
ArsR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_619_24
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26535..27188)
DNA (654bp) protein (218aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPS3_9SPHI
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
phoU; phosphate uptake regulator, PhoU; K02039 phosphate transport system protein
SCNpilot_expt_1000_bf_scaffold_619_25
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27210..28004)
DNA (795bp) protein (265aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Phosphate transport ATP-binding protein PstB n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GQB2_9SPHI
phosphate ABC transporter ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_619_26
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27980..28843)
DNA (864bp) protein (288aa)
Phosphate transport system permease protein PstA n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXN0_9SPHI rbh
Phosphate transport system permease protein PstA {ECO:0000313|EMBL:EOR93704.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
phosphate ABC transporter permease PstA
SCNpilot_expt_1000_bf_scaffold_619_27
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28836..29723)
DNA (888bp) protein (296aa)
Phosphate transport system permease protein PstC n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPT4_9SPHI rbh
Phosphate transport system permease protein PstC {ECO:0000313|EMBL:EOR93703.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
phosphate ABC transporter permease PstC rbh
SCNpilot_expt_1000_bf_scaffold_619_28
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29723..30715)
DNA (993bp) protein (331aa)
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS n=1 Tax=Arcticibacter svalbardensis MN12-7 PF4_9SPHI">RepID=R9GPF4_9SPHI rbh
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS {ECO:0000313|EMBL:EOR93702.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
phosphate binding protein rbh
SCNpilot_expt_1000_bf_scaffold_619_29
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30761..31606)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MZM6_9SPHI
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ACU02989.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_619_30
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32165..33691)
DNA (1527bp) protein (509aa)
sulfate permease n=1 Tax=Empedobacter brevis RepID=UPI00035DB5D5 rbh
Putative sulfate transporter {ECO:0000313|EMBL:GAE65857.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
sulfate permease rbh
Displaying items 1-30 of 38 in total

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