name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_633_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(115..675)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4I2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZP67331.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_2
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(741..1922)
|
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IVZ4_METNO
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ACL62584.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_3
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2035..3303
|
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QGY9_BRESC
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ADL00955.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_4
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3300..4469
|
Integrase/recombinase protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBU7_METED
integrase/recombinase protein
Integrase/recombinase protein {ECO:0000313|EMBL:CAX24244.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4517..5812)
|
Tiorf21 protein n=1 Tax=Rhizobium radiobacter RepID=O66167_RHIRD
rbh
Tiorf21 protein {ECO:0000313|EMBL:BAA87646.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
repC; replication initiation protein RepC
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_633_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5972..6964)
|
Uncharacterized protein n=2 Tax=Rhizobium fredii RepID=G9ADC5_RHIFH
rbh
putative replication protein B
rbh
Plasmid partitioning protein RepB {ECO:0000313|EMBL:CEO91196.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7043..8227)
|
Uncharacterized protein n=2 Tax=Rhizobium fredii RepID=G9ADC4_RHIFH
rbh
putative replication protein A
rbh
RepA protein {ECO:0000313|EMBL:CEO91195.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8662..9039
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR87_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08331.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_9
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9055..9378
|
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z4I1_9RHIZ
Polymerase {ECO:0000313|EMBL:KFG70940.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_633_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9490..10113
|
Autoinducer synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK74_OLICO
autoinducer synthase
Autoinducer synthase {ECO:0000313|EMBL:AEI08328.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_11
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10140..10394
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G7_AFIFE
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53757.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_633_12
unknown
|
Not on your lists |
10453..10683
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_633_13
unknown
|
Not on your lists |
10708..10899
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_633_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11011..11703)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUZ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79417.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_633_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11700..12170)
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFF8_NITHX
Uncharacterized protein {ECO:0000313|EMBL:ETR79418.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_633_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12210..12860)
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFF9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65038.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12871..13431)
|
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR79_OLICM
Uncharacterized protein {ECO:0000313|EMBL:KIZ46704.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_633_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13428..14012)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003720721
Nuclease {ECO:0000313|EMBL:KIZ46703.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_633_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14074..14640)
|
Succinoglycan biosynthesis protein exoI-like n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFG3_NITHX
succinoglycan biosynthesis protein exoI-like
Succinoglycan biosynthesis protein exoI-like {ECO:0000313|EMBL:ABE65034.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14666..15163)
|
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR75_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08319.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15260..15928
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003829101
Lytic transglycosylase {ECO:0000313|EMBL:KIZ46699.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
putative lytic transglycosylase
|
|
SCNpilot_expt_1000_bf_scaffold_633_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15941..16243
|
Conjugal transfer protein, TrbC n=2 Tax=Oligotropha carboxidovorans RepID=B6JK41_OLICO
virB2; type IV secretion family protein VirB2; K03197 type IV secretion system protein VirB2
Type IV secretion family protein VirB2 {ECO:0000313|EMBL:AEI08317.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_23
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16240..16536
|
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK42_OLICO
virB3; type IV secretion protein VirB3; K03198 type IV secretion system protein VirB3
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53814.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
|
|
SCNpilot_expt_1000_bf_scaffold_633_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16546..18957
|
type VI secretion protein n=1 Tax=Afipia birgiae RepID=UPI0002EA45C2
rbh
Type IV secretion/conjugal transfer ATPase, VirB4 family {ECO:0000313|EMBL:ABE65029.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
type IV secretion/conjugal transfer ATPase; K03199 type IV secretion system protein VirB4
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_633_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18954..19784
|
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFG9_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KIZ46695.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_633_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19795..20502
|
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK45_OLICO
Conjugal transfer protein {ECO:0000313|EMBL:KIZ46694.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_633_27
unknown
|
Not on your lists |
20499..20696
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_633_28
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20693..20887
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DBC7D0
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53115.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
lipoprotein
|
|
SCNpilot_expt_1000_bf_scaffold_633_29
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20896..22029
|
conjugal transfer protein n=1 Tax=Afipia birgiae RepID=UPI0002F621E1
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KIZ46692.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
virB6; type IV secretion protein VirB6; K03201 type IV secretion system protein VirB6
|
|
SCNpilot_expt_1000_bf_scaffold_633_30
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22026..22742
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRK1_9BRAD
Type VI secretion protein {ECO:0000313|EMBL:ETR79433.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
VirB8; K03203 type IV secretion system protein VirB8
|