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SCNpilot_expt_1000_bf_scaffold_2112

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2112_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..194)
DNA (192bp) protein (64aa)
cytochrome c biogenesis protein transmembrane subunit; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8]
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R5N7_9RHIZ
Cytochrome C biogenesis protein {ECO:0000313|EMBL:EZQ16273.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_expt_1000_bf_scaffold_2112_2
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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460..888
DNA (429bp) protein (143aa)
Two-component system response regulator QseB n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RMJ8_9RHIZ
Two-component system response regulator QseB {ECO:0000313|EMBL:ESR27256.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
two component transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2112_3
Marinobacter sp. AK21, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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896..1366
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) RepID=F6CWP1_MARPP
Uncharacterized protein {ECO:0000313|EMBL:KEF32706.1}; TaxID=1137280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. AK21.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2112_4
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1555..3627
DNA (2073bp) protein (691aa)
soluble lytic murein transglycosylase precursor; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
UPI0003CFC9E9 related cluster n=1 Tax=unknown RepID=UPI0003CFC9E9
Lytic transglycosylase {ECO:0000313|EMBL:ESZ24167.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
SCNpilot_expt_1000_bf_scaffold_2112_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4351..4962
DNA (612bp) protein (204aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F928_9RHIZ
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:CCV08396.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ErfK/YbiS/YcfS/YnhG
SCNpilot_expt_1000_bf_scaffold_2112_6
unknown

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5056..5343
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2112_7
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6249..6812
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Klebsiella sp. OBRC7 RepID=J5W3F5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:AKE61720.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2112_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6817..8574
DNA (1758bp) protein (586aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035E9BDF rbh
Penicillin-binding protein {ECO:0000313|EMBL:KDP73248.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_2112_9
unknown

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9102..9512
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2112_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9974..10828
DNA (855bp) protein (285aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAN8_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2112_11
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11039..11620)
DNA (582bp) protein (194aa)
UPI0003CEC41F related cluster n=1 Tax=unknown RepID=UPI0003CEC41F
Uncharacterized protein {ECO:0000313|EMBL:ESZ17117.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2112_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12094..13644
DNA (1551bp) protein (517aa)
Putative transposase y4bL/y4kJ/y4tB n=2 Tax=Rhizobium sp. (strain NGR234) RepID=Y4BL_RHISN rbh
transposase rbh
Putative transposase y4bL/y4kJ/y4tB; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_expt_1000_bf_scaffold_2112_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13662..14405
DNA (744bp) protein (248aa)
UPI0003CE0638 related cluster n=1 Tax=unknown RepID=UPI0003CE0638
Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA {ECO:0000313|EMBL:CDX24927.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transposase
SCNpilot_expt_1000_bf_scaffold_2112_14
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15049..16434
DNA (1386bp) protein (462aa)
Multicopper oxidase, type 3 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIN0_9RHIZ rbh
Multicopper oxidase, type 3 {ECO:0000313|EMBL:CCV11944.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
multicopper oxidase, type 3
SCNpilot_expt_1000_bf_scaffold_2112_15
unknown

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16513..16653
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2112_16
unknown

Not on your lists

16732..16863
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 16 items

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