name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2322_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..1026
|
DEAD/DEAH box helicase-like n=2 Tax=Novosphingobium RepID=F6IGU9_9SPHN
ATP-dependent RNA helicase atu1833 {ECO:0000313|EMBL:GAO56237.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
DEAD/DEAH box helicase
|
|
SCNpilot_expt_1000_bf_scaffold_2322_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1296..2240
|
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
isocitrate dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B61EA6
|
|
SCNpilot_expt_1000_bf_scaffold_2322_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria
|
Not on your lists |
2354..3598
|
Putative esterase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022Q3_SOLUE
rbh
esterase
rbh
Putative esterase {ECO:0000313|EMBL:ABJ84047.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2322_4
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3678..5447
|
Glutathione-regulated potassium-efflux system protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHM4_9SPHN
rbh
Glutathione-regulated potassium-efflux system protein {ECO:0000313|EMBL:EHJ59184.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
glutathione-regulated potassium-efflux system protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2322_5
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(5470..6300)
|
Xylose isomerase domain-containing protein n=1 Tax=Mycobacterium sp. H4Y RepID=L8KPA7_9MYCO
xylose isomerase domain-containing protein
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:EUA59697.1}; TaxID=1299331 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare 1956.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2322_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8213..10867)
|
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Alanine--tRNA ligase n=1 Tax=Sphingomonas sp. LH128 RepID=J8SEU2_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2322_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10918..11856)
|
Sphingosine kinase/eukaryotic diacylglycerol kinase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FQZ8_9BURK
Diacylglycerol kinase catalytic domain protein {ECO:0000313|EMBL:AID31776.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein; K07029
|
|
SCNpilot_expt_1000_bf_scaffold_2322_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11985..14084
|
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8V2_NOVAD
rbh
fusA; elongation factor G; K02355 elongation factor G
rbh
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:ABD25721.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2322_9
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14217..15356
|
Secretory lipase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPL7_9SPHN
rbh
Secretory lipase {ECO:0000313|EMBL:EJU12560.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
secretory lipase
|
|
SCNpilot_expt_1000_bf_scaffold_2322_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
|
Not on your lists |
15499..16254
|
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037A85EB
rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG92302.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2322_11
unknown
|
Not on your lists |
comp(16291..16524)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2322_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16559..17083)
|
Protein RecA n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N9K3_ERYLH
recA; recombinase A; K03553 recombination protein RecA
Tax=BJP_IG2102_Porphyrobacter_62_18
|
|
SCNpilot_expt_1000_bf_scaffold_2322_13
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17673..19004)
|
Octaprenyl-diphosphate synthase n=2 Tax=Novosphingobium RepID=F6INH2_9SPHN
Farnesyltranstransferase {ECO:0000313|EMBL:KHK92032.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2322_14
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19070..19405
|
Chorismate mutase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L6A4_9SPHN
Chorismate mutase {ECO:0000313|EMBL:EIZ79954.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2322_15
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19420..19917
|
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
Endoribonuclease YbeY n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HHM6_9SPHN
metal-dependent hydrolase; K07042 probable rRNA maturation factor
|
|
SCNpilot_expt_1000_bf_scaffold_2322_16
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19933..20838
|
CBS domain-containing protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2P2G1_9SPHN
rbh
CBS domain-containing protein {ECO:0000313|EMBL:EJL21137.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2322_17
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20899..21738
|
Transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2GF82_9SPHN
rbh
Transcriptional regulator {ECO:0000313|EMBL:EZP81776.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
LysR family transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2322_18
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21943..22395)
|
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Novosphingobium RepID=F6II42_9SPHN
cyclophilin type peptidyl-prolyl cis-trans isomerase
|
|
SCNpilot_expt_1000_bf_scaffold_2322_19
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22518..23954
|
Magnesium transporter n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9R3_NOVAD
rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
magnesium transporter; K06213 magnesium transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2322_20
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23960..24352
|
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6II40_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ60794.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2322_21
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24354..25109)
|
AraC family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6D900
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABZ73578.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2322_22
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25106..25480)
|
glyoxalase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6B705
glyoxalase/bleomycin resistance protein/dioxygenase; K06996
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2322_23
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25567..25974)
|
NAD+ diphosphatase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C4Z4_9SPHN
Zn-finger containing NTP pyrophosphohydrolase {ECO:0000313|EMBL:EJL21132.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2322_24
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26407..27327)
|
UPI0003CFCD84 related cluster n=1 Tax=unknown RepID=UPI0003CFCD84
twin-arginine translocation pathway signal protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|