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SCNpilot_expt_1000_bf_scaffold_2546

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2546_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..396
DNA (396bp) protein (132aa)
WGS project CALM00000000 data, contig 821 n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D0N7_STEMA
WGS project CALM00000000 data, contig 821 {ECO:0000313|EMBL:CCP17222.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
17 kDa surface antigen-like protein; K06077 outer membrane lipoprotein SlyB
SCNpilot_expt_1000_bf_scaffold_2546_2
unknown

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442..810
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2546_3
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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947..1735
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Burkholderia cenocepacia RepID=B4E779_BURCJ
Membrane protein {ECO:0000313|EMBL:KHK58693.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2546_4
Ancylostoma duodenale, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

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1938..2417
DNA (480bp) protein (160aa)
DNA repair protein RadC n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D015_STEMA
DNA repair protein RadC {ECO:0000313|EMBL:KIH48894.1}; TaxID=51022 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma.;" source="Ancylostoma duodenale.;"
RadC family protein; K03630 DNA repair protein RadC
SCNpilot_expt_1000_bf_scaffold_2546_5
unknown

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3001..3396
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2546_6
unknown

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3393..3560
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2546_7
unknown

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3706..4158
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2546_8
unknown

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4337..4717
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2546_9
unknown

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4753..4974
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2546_10
unknown

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5137..5637
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2546_11
endosymbiont of Acanthamoeba sp. UWC36, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5637..6119
DNA (483bp) protein (161aa)
NI3C DARPIN MUTANT5 n=1 Tax=synthetic construct RepID=UPI0001E0709D
Uncharacterized protein {ECO:0000313|EMBL:KIE04130.1}; TaxID=86105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae.;" source="endosymbiont of Acanthamoeba sp. UWC36.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2546_12
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6207..7739
DNA (1533bp) protein (511aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D1F4_STEMA rbh
DNA methylase {ECO:0000313|EMBL:KHM91558.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
Adenine specific DNA methylase rbh
SCNpilot_expt_1000_bf_scaffold_2546_13
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7741..10119
DNA (2379bp) protein (793aa)
hypothetical protein n=1 Tax=Xanthomonas campestris RepID=UPI0002FCC4F5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP84227.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
Type III restriction enzyme, Res subunit rbh
SCNpilot_expt_1000_bf_scaffold_2546_14
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10076..10405
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Xanthomonas campestris RepID=UPI0002FCC4F5
Uncharacterized protein {ECO:0000313|EMBL:KDP84227.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
Type III restriction enzyme, Res subunit
Displaying 14 items

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