name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2637_1
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..824)
|
Citrate synthase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L764_9SPHN
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2637_2
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(837..2120)
|
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
Glutamate--tRNA ligase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPZ1_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_2637_3
unknown
|
Not on your lists |
comp(2362..2679)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2637_4
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3297..4574
|
Predicted membrane metal-binding protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NA92_ERYLH
Metal-binding protein {ECO:0000313|EMBL:KHK91994.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
membrane metal-binding protein; K02238 competence protein ComEC
|
|
SCNpilot_expt_1000_bf_scaffold_2637_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4554..5252)
|
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
LexA repressor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=LEXA_NOVAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_6
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5320..6540)
|
Molybdopterin molybdochelatase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIP7_9SPHN
rbh
Molybdopterin molybdochelatase {ECO:0000313|EMBL:EHJ58989.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2637_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6537..7010)
|
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI42_9SPHN
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
GTP cyclohydrolase subunit MoaC; K03637 molybdenum cofactor biosynthesis protein C
|
|
SCNpilot_expt_1000_bf_scaffold_2637_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7084..7884)
|
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48]
indole-3-glycerol-phosphate synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5D08E
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_9
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7881..8873)
|
Anthranilate phosphoribosyltransferase {ECO:0000313|EMBL:AKH41657.1}; EC=2.4.2.18 {ECO:0000313|EMBL:AKH41657.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18]
rbh
Anthranilate phosphoribosyltransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9K6_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_10
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8870..9454)
|
anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27]
rbh
Anthranilate synthase component II n=1 Tax=Sphingomonas sp. LH128 RepID=J8V9K4_9SPHN
rbh
Anthranilate synthase component II {ECO:0000313|EMBL:EZP84875.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2637_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9497..10039)
|
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000318DD81
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
|
|
SCNpilot_expt_1000_bf_scaffold_2637_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10049..11536)
|
Anthranilate synthase, aminase component {ECO:0000313|EMBL:GAO55969.1}; EC=4.1.3.27 {ECO:0000313|EMBL:GAO55969.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27]
rbh
Anthranilate synthase component I n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIQ3_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_13
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11550..13490)
|
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6R4_NOVAD
rbh
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_14
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14513..14899
|
protein translocase subunit secG n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B795E4
Scaffold17, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30770.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
protein translocase subunit secG; K03075 preprotein translocase subunit SecG
|
|
SCNpilot_expt_1000_bf_scaffold_2637_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15051..16310
|
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
CTP synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PYRG_NOVAD
|
|
SCNpilot_expt_1000_bf_scaffold_2637_16
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16361..16678
|
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
CTP synthetase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4E6A6
|
|
SCNpilot_expt_1000_bf_scaffold_2637_17
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16995..17462)
|
Molecular chaperone IbpA n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WJ02_9SPHN
Heat-shock protein {ECO:0000313|EMBL:KHL26039.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
molecular chaperone IbpA; K04080 molecular chaperone IbpA
|
|
SCNpilot_expt_1000_bf_scaffold_2637_18
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17618..17875
|
glutaredoxin n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B78C33
Glutaredoxin, GrxC family {ECO:0000313|EMBL:EJK83192.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
glutaredoxin; K03676 glutaredoxin 3
|
|
SCNpilot_expt_1000_bf_scaffold_2637_19
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17829..18689
|
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPX3_9SPHN
rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:EZP84888.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18698..19171
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SHR5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55979.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2637_21
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19432..19746
|
Septum formation initiator n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6S4_NOVAD
septum formation initiator
Septum formation initiator {ECO:0000313|EMBL:ABD26449.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2637_22
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19881..20975
|
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
pyruvate dehydrogenase (lipoamide) (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
rbh
Pyruvate dehydrogenase (Lipoamide) n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZA06_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20975..21286
|
pyruvate dehydrogenase subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase subunit beta {ECO:0000313|EMBL:AGH50339.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AGH50339.1};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Pyruvate dehydrogenase subunit beta n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S744_9SPHN
|
|
SCNpilot_expt_1000_bf_scaffold_2637_24
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21398..22378
|
pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPQ9_9SPHN
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:EHJ58735.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2637_25
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22515..23009
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZX10_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK91984.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2637_26
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23048..23575
|
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD05C2
Uncharacterized protein {ECO:0000313|EMBL:GAO56073.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2637_27
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23546..24829)
|
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
glucose inhibited division protein Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
rbh
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L7D7_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_28
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24843..27638)
|
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
DNA gyrase subunit A n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPU9_9SPHN
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2637_29
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27958..29259
|
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIY7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO56079.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2637_30
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29360..29941)
|
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
Carbonic anhydrase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G713_NOVAD
|