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SCNpilot_expt_1000_bf_scaffold_2870

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2870_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(235..513)
DNA (279bp) protein (93aa)
Putative lipoprotein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IL66_BORPD
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AKE73396.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_1000_bf_scaffold_2870_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(518..1453)
DNA (936bp) protein (312aa)
Transcriptional regulator n=8 Tax=Pseudomonas aeruginosa RepID=S0ICJ3_PSEAI rbh
bphR; transcriptional regulator rbh
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:AKE69540.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_1000_bf_scaffold_2870_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1642..1905)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8YNM8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETD48022.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
SCNpilot_expt_1000_bf_scaffold_2870_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2031..2663)
DNA (633bp) protein (211aa)
Uncharacterized protein n=15 Tax=Pseudomonas aeruginosa RepID=U1FJ24_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETD48021.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
putative ORF2
SCNpilot_expt_1000_bf_scaffold_2870_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2686..3423)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDV4_PSEAI rbh
Membrane protein {ECO:0000313|EMBL:ETD48020.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2870_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3598..4839)
DNA (1242bp) protein (414aa)
Outer membrane protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK07_9BURK
outer membrane protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_2870_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4836..5138)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK08_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70980.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Protein of unknown function (DUF3240)
SCNpilot_expt_1000_bf_scaffold_2870_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5131..8223)
DNA (3093bp) protein (1031aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK09_9BURK
heavy metal efflux pump, cobalt-zinc-cadmium
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_2870_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8225..9001)
DNA (777bp) protein (259aa)
RND family efflux transporter, MFP subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK10_9BURK
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EHR70982.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
membrane-fusion protein
SCNpilot_expt_1000_bf_scaffold_2870_10
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9497..10492)
DNA (996bp) protein (332aa)
Uncharacterized protein n=11 Tax=Pseudomonas aeruginosa RepID=U8CD25_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG52185.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_2870_11
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10492..10890)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WBZ8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CEG52184.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
hypothetical protein; K07737 putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2870_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10988..11539)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2BTW5_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR82786.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;"
SCNpilot_expt_1000_bf_scaffold_2870_13
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11479..11982)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYS7_COMTE
Uncharacterized protein {ECO:0000313|EMBL:EED68038.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
virD2; relaxase type IV secretory pathway VirD2
Displaying 13 items

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