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SCNpilot_expt_1000_bf_scaffold_8467

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8467_1
unknown

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8467_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

340..612
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371F589
competence protein ComEA; K02237 competence protein ComEA
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_8467_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1015..1614
DNA (600bp) protein (200aa)
zinc/iron permease n=1 Tax=Thiobacillus thioparus RepID=UPI0003723748
ZIP Zinc transporter
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_8467_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1552..1770)
DNA (219bp) protein (73aa)
hypothetical protein id=12494323 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_8467_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1798..3108
DNA (1311bp) protein (437aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-]
ribosomal protein S12 methylthiotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000378CAD4
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8467_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3136..4134)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003633C31 rbh
hypothetical protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_8467_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4176..4595
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=1343845 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_8467_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4639..5883
DNA (1245bp) protein (415aa)
cell division protein FtsX n=1 Tax=Thiobacillus thioparus RepID=UPI0003821015 rbh
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_8467_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5950..6537
DNA (588bp) protein (196aa)
lipoprotein releasing system, ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003709787
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_8467_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6550..8877
DNA (2328bp) protein (776aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AD8A8 rbh
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AAZ97712.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC
SCNpilot_expt_1000_bf_scaffold_8467_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8786..9319)
DNA (534bp) protein (178aa)
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_8467_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9529..10989
DNA (1461bp) protein (487aa)
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5]
GTP pyrophosphokinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E3965
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8467_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11019..11426
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371F5F9
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8467_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11442..11870)
DNA (429bp) protein (143aa)
tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-]
tRNA 2-selenouridine synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003763DDE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8467_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12681..12854)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C7206
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_8467_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12979..13422)
DNA (444bp) protein (148aa)
single-stranded DNA-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368E61F
smpB; SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_8467_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13473..13814
DNA (342bp) protein (114aa)
cyclase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B4139
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97708.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 17 items

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