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SCNpilot_expt_1000_bf_scaffold_8474

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8474_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..827
DNA (825bp) protein (275aa)
DNA-cytosine methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Cytosine-specific methyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDM7_ACISJ
SCNpilot_expt_1000_bf_scaffold_8474_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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827..1690
DNA (864bp) protein (288aa)
Type II DNA restriction endonuclease R.NGOI n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDM8_ACISJ rbh
type II DNA restriction endonuclease R.NGOI rbh
Type II DNA restriction endonuclease R.NGOI {ECO:0000313|EMBL:ABM44353.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_1000_bf_scaffold_8474_3
unknown

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1694..1990
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8474_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2001..2420
DNA (420bp) protein (140aa)
DNA mismatch endonuclease vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
T/G mismatch-specific endonuclease {ECO:0000313|EMBL:ABD08019.1}; EC=3.1.-.- {ECO:0000313|EMBL:ABD08019.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
T/G mismatch-specific endonuclease n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUU1_RHOP2
SCNpilot_expt_1000_bf_scaffold_8474_5
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2424..2891
DNA (468bp) protein (156aa)
Putative transcriptional regulator n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3BDE7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AHB06149.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8474_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2979..3899)
DNA (921bp) protein (307aa)
Trypsin domain-containing protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASD6_PSEAI rbh
Serine protease {ECO:0000313|EMBL:AAP22630.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
trypsin domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8474_7
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3886..4107)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN14_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KFJ90151.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
SCNpilot_expt_1000_bf_scaffold_8474_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4568..5401)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A899_PSEAI
TraA {ECO:0000313|EMBL:AGG19209.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
conjugal transfer relaxase TraI
SCNpilot_expt_1000_bf_scaffold_8474_9
unknown

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5509..5946
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8474_10
unknown

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6100..6885
DNA (786bp) protein (262aa)

This feature has no annotations

Displaying 10 items

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