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SCNpilot_expt_1000_bf_scaffold_1285

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1285_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..497
DNA (495bp) protein (165aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E5645
ABC-type multidrug transporter ATPase; K09687 antibiotic transport system ATP-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1285_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

570..1271
DNA (702bp) protein (234aa)
metal-dependent hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI000378134C
ABC-2 type transport system permease; K09686 antibiotic transport system permease protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1285_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1299..1535
DNA (237bp) protein (79aa)
BolA family protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D3BF7
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1285_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1536..2789
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000378ADE6 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1285_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2930..3592
DNA (663bp) protein (221aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] rbh
ATP phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037D189F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1285_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3645..5426
DNA (1782bp) protein (594aa)
asparagine synthetase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370A69A rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1285_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5495..6757
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D41C3 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97841.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7172..8014
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHP6_THIDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ97840.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8022..8738
DNA (717bp) protein (239aa)
oxo-acyl acyl carrier protein dehydrogenase; K00100 [EC:1.1.1.-] rbh
Possible oxo-acyl acyl carrier protein dehydrogenase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHP7_THIDA rbh
Possible oxo-acyl acyl carrier protein dehydrogenase {ECO:0000313|EMBL:AAZ97839.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8722..9813
DNA (1092bp) protein (364aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] rbh
3-dehydroquinate synthase {ECO:0000313|EMBL:AAZ97838.1}; EC=4.2.3.4 {ECO:0000313|EMBL:AAZ97838.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
3-dehydroquinate synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHP8_THIDA rbh
SCNpilot_expt_1000_bf_scaffold_1285_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9829..10809
DNA (981bp) protein (327aa)
Putative nucleoside-diphosphate-sugar epimerases n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHP9_THIDA rbh
putative nucleoside-diphosphate-sugar epimerase rbh
Putative nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:AAZ97837.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10809..11930
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ0_THIDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ97836.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11957..14539
DNA (2583bp) protein (861aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ1_THIDA rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ97835.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1285_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14653..15420
DNA (768bp) protein (256aa)
alpha-D-glucose-1-phosphate cytidylyltransferase; K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] rbh
Alpha-D-glucose-1-phosphate cytidylyltransferase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ2_THIDA rbh
Alpha-D-glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:AAZ97834.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15405..16481
DNA (1077bp) protein (359aa)
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] rbh
CDP-glucose 4,6-dehydratase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ3_THIDA rbh
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AAZ97833.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16507..17826
DNA (1320bp) protein (440aa)
Putative dehydratase RfbH n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ4_THIDA rbh
putative dehydratase RfbH; K12452 CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase rbh
Putative dehydratase RfbH {ECO:0000313|EMBL:AAZ97832.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17853..18671
DNA (819bp) protein (273aa)
ABC transporter permease protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ5_THIDA rbh
ABC transporter permease; K09690 lipopolysaccharide transport system permease protein rbh
ABC transporter permease protein {ECO:0000313|EMBL:AAZ97831.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18675..19400
DNA (726bp) protein (242aa)
ABC transporter ATPase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ6_THIDA rbh
ABC transporter ATPase; K09691 lipopolysaccharide transport system ATP-binding protein rbh
ABC transporter ATPase {ECO:0000313|EMBL:AAZ97830.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19449..21212
DNA (1764bp) protein (588aa)
acetolactate synthase; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Acetolactate synthase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHQ7_THIDA rbh
Acetolactate synthase {ECO:0000313|EMBL:AAZ97829.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1285_20
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21262..22026
DNA (765bp) protein (255aa)
glycosyl transferase n=1 Tax=Rhizobium leguminosarum RepID=UPI000377647D
glycosyl transferase family protein; K07011
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_expt_1000_bf_scaffold_1285_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22023..22952
DNA (930bp) protein (310aa)
Putative UDP-glucose 4-epimerase id=1345546 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative UDP-glucose 4-epimerase
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1285_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22949..23908
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EB4AF rbh
putative undecaprenyl phosphate N-acetylglucosaminyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1285_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23898..24266
DNA (369bp) protein (123aa)
multidrug MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003737E24
putative epimerase/dehydratase-like biosynthesis protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 23 items

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