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SCNpilot_expt_1000_bf_scaffold_1369

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1369_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1369_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100..1146)
DNA (1047bp) protein (349aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI0003602592
SCNpilot_expt_1000_bf_scaffold_1369_3
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1320..2447)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00038219E6
group 1 glycosyl transferase rbh
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_1369_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2483..3328)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037D0322
Uncharacterized protein {ECO:0000313|EMBL:KIZ39707.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Predicted Fe-S oxidoreductases
SCNpilot_expt_1000_bf_scaffold_1369_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3298..3618)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037D0322
Uncharacterized protein {ECO:0000313|EMBL:KIZ39707.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
radical SAM domain-containing protein
SCNpilot_expt_1000_bf_scaffold_1369_6
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3643..4848)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000315C15D
putative glycosyl transferase group 1
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_expt_1000_bf_scaffold_1369_7
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4914..6080)
DNA (1167bp) protein (389aa)
Putative glycosyltransferase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7Z5_9EURY
putative glycosyltransferase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
SCNpilot_expt_1000_bf_scaffold_1369_8
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6088..7179)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI000375F50C rbh
Glycosyltransferase {ECO:0000313|EMBL:EUJ11295.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_1369_9
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(7176..9413)
DNA (2238bp) protein (746aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJD3_9BURK
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
SCNpilot_expt_1000_bf_scaffold_1369_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9458..10219)
DNA (762bp) protein (254aa)
Putative glycosyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJC6_9BURK
Putative glycosyltransferase {ECO:0000313|EMBL:EHR70147.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
glycosyl transferase family protein
SCNpilot_expt_1000_bf_scaffold_1369_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10236..11126)
DNA (891bp) protein (297aa)
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_1369_12

Not on your lists

comp(11308..12123)
DNA (816bp) protein (272aa)
Glycosyl transferase, family 2 n=1 Tax=uncultured bacterium RepID=K2CQA8_9BACT
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EKD95370.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1369_13
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12164..13123)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JF76_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ESJ25675.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1369_14
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13120..14631)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036F0331 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU80715.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
polysaccharide biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_1369_15
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14615..16051)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037DD8B6
Uncharacterized protein {ECO:0000313|EMBL:EKU80714.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
SCNpilot_expt_1000_bf_scaffold_1369_16
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16123..16935)
DNA (813bp) protein (271aa)
Sulfotransferase family n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KRD0_9SYNC
Putative uncharacterized protein {ECO:0000313|EMBL:EDX78341.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1369_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16932..17906)
DNA (975bp) protein (325aa)
GDP-L-fucose synthetase; K02377 GDP-L-fucose synthase [EC:1.1.1.271]
GDP-L-fucose synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F6B5E
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1369_18
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17993..18346)
DNA (354bp) protein (118aa)
hypothetical protein id=12497714 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:GAO34438.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1369_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18389..19459)
DNA (1071bp) protein (357aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Thiobacillus thioparus RepID=UPI000363D3B1 rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1369_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19503..20195)
DNA (693bp) protein (231aa)
hypothetical protein id=12497712 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1369_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20211..21110)
DNA (900bp) protein (300aa)
hypothetical protein id=12497711 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AAZ97745.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1369_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21115..22005)
DNA (891bp) protein (297aa)
chain-length determining protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378DABD
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1369_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22044..23432)
DNA (1389bp) protein (463aa)
chain length determinant protein id=12497709 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
chain length determinant protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1369_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23443..24234)
DNA (792bp) protein (264aa)
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein id=12497708 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1369_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24445..25728)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003756945
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_1369_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25896..26555)
DNA (660bp) protein (220aa)
CAAX amino terminal protease n=1 Tax=Thiobacillus thioparus RepID=UPI00035E0A2E
CAAX amino terminal protease family protein; K07052
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1369_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26703..27611)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377D4DF
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1369_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27859..29793)
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C8577 rbh
long-chain fatty acid transport protein; K06076 long-chain fatty acid transport protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_1369_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30010..30654)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHY0_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97753.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
SCNpilot_expt_1000_bf_scaffold_1369_30
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30752..31225
DNA (474bp) protein (158aa)
Putative transposase, IS3/IS911 family n=1 Tax=Variovorax paradoxus B4 RepID=T1XCN2_VARPD
Transposase {ECO:0000313|EMBL:EYS84619.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
putative transposase, IS3/IS911 family
Displaying items 1-30 of 34 in total

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