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SCNpilot_expt_1000_bf_scaffold_1372

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1372_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..465
DNA (465bp) protein (155aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
phosphatidylinositol kinase n=1 Tax=Afipia birgiae RepID=UPI00031D687A
HipA-like protein {ECO:0000313|EMBL:AGB47979.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_expt_1000_bf_scaffold_1372_2
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

462..1586
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VT65_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ22102.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1372_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1664..4288
DNA (2625bp) protein (875aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E4D416 rbh
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_expt_1000_bf_scaffold_1372_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4335..5405
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030F80BB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54528.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1372_5
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5535..6419
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TT89_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN83694.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6452..7144
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000314D49A
Uncharacterized protein {ECO:0000313|EMBL:KEQ53712.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
SCNpilot_expt_1000_bf_scaffold_1372_7
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7335..8528
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003628CEB
Uncharacterized protein {ECO:0000313|EMBL:ETI60079.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1372_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8704..8829
DNA (126bp) protein (42aa)
UPI0003CE3EBB related cluster n=1 Tax=unknown RepID=UPI0003CE3EBB
ParB domain protein nuclease
ParB domain protein nuclease {ECO:0000313|EMBL:EFI53389.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_expt_1000_bf_scaffold_1372_9
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8883..9365
DNA (483bp) protein (161aa)
Putative transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRC6_9RHIZ
Plasmid partitioning protein ParB {ECO:0000313|EMBL:KEQ52202.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
ParB-like protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_1372_10
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9385..10776
DNA (1392bp) protein (464aa)
Putative transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRC6_9RHIZ
Plasmid partitioning protein ParB {ECO:0000313|EMBL:KEQ52202.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
ParB-like protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_1372_11
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10892..11260)
DNA (369bp) protein (123aa)
Rhodospirillum photometricum DSM 122 draft genome sequence n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJR5_RHOPH
hypothetical protein
Rhodospirillum photometricum DSM 122 draft genome sequence {ECO:0000313|EMBL:CCG08230.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_expt_1000_bf_scaffold_1372_12
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11362..11949)
DNA (588bp) protein (196aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=D4Z973_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:KEQ52208.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_13
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11951..14839
DNA (2889bp) protein (963aa)
Methylase n=2 Tax=Sphingobium RepID=T0I6E7_9SPHN
putative methylase/helicase
Methylase {ECO:0000313|EMBL:EQB07225.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SCNpilot_expt_1000_bf_scaffold_1372_14
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14805..16256
DNA (1452bp) protein (484aa)
Phospholipid N-methyltransferase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CDJ9_9RHIZ
Methylase {ECO:0000313|EMBL:KEQ52210.1}; Flags: Precursor;; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
putative methylase/helicase
SCNpilot_expt_1000_bf_scaffold_1372_15
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16256..17293
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HRQ0_9RHIZ rbh
DNA primase {ECO:0000313|EMBL:KGJ18048.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_16
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17606..18529
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4Z969_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:KGJ18047.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18691..19197
DNA (507bp) protein (169aa)
RES domain-containing protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0K1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:CEG10427.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19416..19583
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VTK3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEG10426.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_19
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19724..20167
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CDJ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN03499.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_20
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21213..21458
DNA (246bp) protein (82aa)
XRE family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPM2_9SPHN
XRE family transcriptional regulator {ECO:0000313|EMBL:EJU12565.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1372_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21586..21852
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HJS1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETR77848.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22099..22731)
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG10422.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_1000_bf_scaffold_1372_23
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22888..23169
DNA (282bp) protein (94aa)
Transcriptional regulator n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GG03_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:EQA99596.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1372_24
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23189..24313
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHG6_BREDI rbh
Replication protein {ECO:0000313|EMBL:KIC60521.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
repA; plasmid replication initiator protein
SCNpilot_expt_1000_bf_scaffold_1372_25
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24310..24948
DNA (639bp) protein (213aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJB4_XANP2 rbh
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ABS68107.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_1372_26
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24945..25199
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJQ1_RHOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG08216.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_expt_1000_bf_scaffold_1372_27
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25196..25714
DNA (519bp) protein (173aa)
UPI0003CDFF8E related cluster n=1 Tax=unknown RepID=UPI0003CDFF8E
Uncharacterized protein {ECO:0000313|EMBL:KFC64472.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1372_28
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25711..26256
DNA (546bp) protein (182aa)
Conjugative transfer signal peptidase TraF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGG7_9BRAD
Peptidase S26 {ECO:0000313|EMBL:KFI25265.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
traF2; conjugal transfer protein TraF
SCNpilot_expt_1000_bf_scaffold_1372_29
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26304..26639
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJB8_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68111.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_1372_30
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26644..27399
DNA (756bp) protein (252aa)
hypothetical protein, partial n=1 Tax=Afipia birgiae RepID=UPI00036A58BC rbh
lytic transglycosylase
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:CCG08220.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
Displaying items 1-30 of 46 in total

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