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SCNpilot_expt_1000_bf_scaffold_1741

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1741_1
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..271)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360A021
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL73904.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
SCNpilot_expt_1000_bf_scaffold_1741_2
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(761..1285)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AV31_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL01202.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
SCNpilot_expt_1000_bf_scaffold_1741_3
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1327..1674)
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KHK58679.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
SCNpilot_expt_1000_bf_scaffold_1741_4
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1983..2813)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036C04B2 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETF03013.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1741_5
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2810..3235)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00035E452A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGY58753.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
SCNpilot_expt_1000_bf_scaffold_1741_6
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3232..3822)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JAA2_BURVG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO53205.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
SCNpilot_expt_1000_bf_scaffold_1741_7
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

3982..4284
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI00037C2C54
hypothetical protein
Tax=RBG_16_Zixibacteria_53_22_curated
SCNpilot_expt_1000_bf_scaffold_1741_8
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

4259..5440
DNA (1182bp) protein (394aa)
hypothetical protein id=12553546 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
UBA/THIF-type NAD/FAD binding fold protein rbh
Tax=RBG_16_Zixibacteria_53_22_curated
SCNpilot_expt_1000_bf_scaffold_1741_9
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5437..5940
DNA (504bp) protein (168aa)
hypothetical protein id=12553547 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFF26984.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1741_10
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6015..6266
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2F3I0_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:EJL03528.1}; TaxID=1038922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens Q2-87.;"
SCNpilot_expt_1000_bf_scaffold_1741_11
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6318..6524
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003777F8F
Uncharacterized protein {ECO:0000313|EMBL:KJZ03096.1}; TaxID=579478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S2151.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1741_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6804..7244)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CB7BA
XRE family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_1741_13
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7606..7836
DNA (231bp) protein (77aa)
Phage-related integrase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8I3_AROAE
int; phage-related integrase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
SCNpilot_expt_1000_bf_scaffold_1741_14
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8204..9334)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTM2_SIDLE rbh
Uncharacterized protein {ECO:0000313|EMBL:AJZ60379.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1741_15
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9422..9637)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000380916A
Uncharacterized protein {ECO:0000313|EMBL:EKK01084.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1741_16
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9630..11456)
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035CC03A rbh
Protein containing DUF87 {ECO:0000313|EMBL:EKK01085.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
putative ATPase rbh
SCNpilot_expt_1000_bf_scaffold_1741_17
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11505..12707)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Rhodopirellula baltica SH28 RepID=K5E5M6_RHOBT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKK01086.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1741_18
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13084..13434)
DNA (351bp) protein (117aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000378B0FF
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
SCNpilot_expt_1000_bf_scaffold_1741_19
unknown

Not on your lists

13593..13853
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1741_20
unknown

Not on your lists

comp(13924..14217)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361B72E
Displaying 20 items

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