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SCNpilot_expt_1000_bf_scaffold_3254

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3254_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3..293
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003687589
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_3254_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1024..1683
DNA (660bp) protein (220aa)
yadF_[C]; Carbonic anhydrase (EC:4.2.1.1)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QUP2_9ZZZZ
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_3254_3
unknown

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2187..2390
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3254_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2506..3405)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUZ6_POLNA
LysR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_3254_5
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3548..4345)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F487A rbh
zinc/iron permease
Zinc/iron permease {ECO:0000313|EMBL:BAN35653.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_expt_1000_bf_scaffold_3254_6
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4376..4558)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368C7E8
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KGM41621.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
NADH dehydrogenase, FAD-containing subunit
SCNpilot_expt_1000_bf_scaffold_3254_7
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4694..5341)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D118A rbh
OmpW family protein {ECO:0000313|EMBL:EGK70445.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
outer membrane protein, OmpW family; K07275 outer membrane protein
SCNpilot_expt_1000_bf_scaffold_3254_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5573..7162
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036AC290 rbh
Fis family transcriptional regulator rbh
Tax=CG_Rhodocyc_01
SCNpilot_expt_1000_bf_scaffold_3254_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7672..8307)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378C717
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98415.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 9 items

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