name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3288_1
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..568
|
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00037501AD
Uncharacterized protein {ECO:0000313|EMBL:KHK90187.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
dihydrodipicolinate reductase
|
|
SCNpilot_expt_1000_bf_scaffold_3288_2
unknown
|
Not on your lists |
623..1030
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3288_3
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1137..1574
|
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7A8_NOVAD
glutathione-dependent formaldehyde-activating protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3288_4
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1613..1816
|
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
UPI0003CFD755 related cluster n=1 Tax=unknown RepID=UPI0003CFD755
|
|
SCNpilot_expt_1000_bf_scaffold_3288_5
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1842..2537)
|
Transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2GE33_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:EJL20698.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3288_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(2570..3040)
|
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H3X6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP84535.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3288_7
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3056..4396)
|
hypothetical protein n=1 Tax=Rhodococcus rhodochrous RepID=UPI0002DABEA3
rbh
Dioxygenase {ECO:0000313|EMBL:CDP82335.1}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
Rieske (2Fe-2S) domain-containing protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3288_8
unknown
|
Not on your lists |
4715..4945
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3288_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4942..5292
|
RNA polymerase ECF-type sigma factor n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S206_9SPHN
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:AGH50030.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3288_10
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5660..6343
|
Transcriptional regulator, putative n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UKH4_9RHOB
Transcriptional regulator, putative {ECO:0000313|EMBL:EAP88683.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
anti-FecI sigma factor FecR
|
|
SCNpilot_expt_1000_bf_scaffold_3288_11
unknown
|
Not on your lists |
comp(6234..8267)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3288_12
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8405..9409
|
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VMV0_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:EJU11935.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_expt_1000_bf_scaffold_3288_13
unknown
|
Not on your lists |
9426..10244
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3288_14
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10394..12055
|
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C17B
rbh
Uncharacterized protein {ECO:0000313|EMBL:KFD27786.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3288_15
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12580..14940)
|
Outer membrane receptor protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WDQ2_9SPHN
rbh
Outer membrane receptor protein {ECO:0000313|EMBL:EJK80765.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
TonB-dependent receptor
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3288_16
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15209..16171)
|
Transcriptional regulator, LacI family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAC1_NOVAD
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KGB54495.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
LacI family transcription regulator; K02529 LacI family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3288_17
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16867..17292)
|
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A769
Uncharacterized protein {ECO:0000313|EMBL:EJU14978.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
|