name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3456_1
unknown
|
Not on your lists |
554..649
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3456_2
uncultured Sphingomonadales bacterium HF0500_24B12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
991..2514
|
Membrane protein involved in the export of o-antigen and teichoic acid n=1 Tax=uncultured Sphingomonadales bacterium HF0500_24B12 RepID=E0XYI6_9SPHN
rbh
Membrane protein involved in the export of o-antigen and teichoic acid {ECO:0000313|EMBL:ADI19477.1}; TaxID=710993 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; environmental samples.;" source="uncultured Sphingomonadales bacterium HF0500_24B12.;"
capsular polysaccharide transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3456_3
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2519..4501
|
Putative sulfatase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N729_ERYLH
rbh
sulfatase
rbh
Putative sulfatase {ECO:0000313|EMBL:ABC64512.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3456_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4551..6371
|
ABC transporter related protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G506_NOVAD
rbh
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial
rbh
ABC transporter-like protein {ECO:0000313|EMBL:KHS47052.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3456_5
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6374..7219
|
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4A3C5
Uncharacterized protein {ECO:0000313|EMBL:EDL48941.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
hypothetical protein; K07029
|
|
SCNpilot_expt_1000_bf_scaffold_3456_6
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7216..7416)
|
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6IL34_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92136.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3456_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7458..7961)
|
ATP-dependent protease ATPase subunit HslU n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2T8_9SPHN
ATP-dependent protease ATPase subunit HslU {ECO:0000256|SAAS:SAAS00089650}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
ATP-dependent HslUV protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
|
|
SCNpilot_expt_1000_bf_scaffold_3456_8
unknown
|
Not on your lists |
8003..8458
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3456_9
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8751..9311)
|
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
rbh
ATP-dependent protease subunit HslV n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G502_NOVAD
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3456_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9373..9867)
|
SmpA/OmlA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEM9_9SPHN
SmpA/OmlA {ECO:0000313|EMBL:EHJ60274.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
SmpA/OmlA protein
|
|
SCNpilot_expt_1000_bf_scaffold_3456_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10038..10553
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G500_NOVAD
Ubiquinol-cytochrome C chaperone {ECO:0000313|EMBL:GAO53842.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3456_12
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10550..11074
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4Z9_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS46888.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3456_13
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11296..12519)
|
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CS83_SPHYA
rbh
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:KEZ19704.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
L-carnitine dehydratase/bile acid-inducible protein F
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3456_14
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12539..12934)
|
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q374_9SPHN
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EJL34582.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3456_15
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13033..13857
|
DNA-binding domain-containing protein, AraC-type n=1 Tax=Novosphingobium sp. AP12 RepID=J2HG21_9SPHN
rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL34583.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
AraC family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3456_16
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13821..14366)
|
Single-stranded DNA-binding protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL26_9SPHN
rbh
single-strand DNA-binding protein; K03111 single-strand DNA-binding protein
rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3456_17
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14619..14717)
|
iron transporter FeoB n=1 Tax=Sphingomonas wittichii RepID=UPI0003797A9A
ferrous iron transport protein B; K04759 ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:ABQ68810.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
|