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SCNpilot_expt_1000_bf_scaffold_5228

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5228_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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54..1814
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4E2_9BRAD
Plasmid stabilization protein {ECO:0000313|EMBL:CDN94502.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
ParB-like protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_5228_2
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1912..2016
DNA (105bp) protein (35aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE80066.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCNpilot_expt_1000_bf_scaffold_5228_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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2069..2182
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1A3_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ68748.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_5228_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2179..2478
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC82_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP55060.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5228_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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2574..2996
DNA (423bp) protein (141aa)
Antirestriction protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1A1_POLGS
antirestriction protein
Antirestriction protein {ECO:0000313|EMBL:ADZ68746.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_5228_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3152..3700
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3S2_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS15876.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_expt_1000_bf_scaffold_5228_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3769..4170
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC85_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:CDN94509.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5228_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4180..4374
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BN4_MESSB
Uncharacterized protein {ECO:0000313|EMBL:CDN94510.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5228_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4447..4863
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA0_OLICO
Uncharacterized protein {ECO:0000313|EMBL:CDN94511.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5228_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4856..5500
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDS8_ZYMMN
Uncharacterized protein {ECO:0000313|EMBL:CDN94512.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5228_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5582..5980)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC50_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP55058.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
SCNpilot_expt_1000_bf_scaffold_5228_12
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6238..10554
DNA (4317bp) protein (1439aa)
Methylase/helicase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC49_RHIRD
Methylase/helicase {ECO:0000313|EMBL:CDN94514.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
methylase/helicase
SCNpilot_expt_1000_bf_scaffold_5228_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10554..11600
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC48_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP55056.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
DNA primase
SCNpilot_expt_1000_bf_scaffold_5228_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11910..12494
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC47_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:CDN94516.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
Displaying 14 items

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