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SCNpilot_expt_1000_bf_scaffold_5513

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5513_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..118
DNA (117bp) protein (39aa)
Flagellar basal-body rod protein FlgF n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFW1_RHITR
flgF; flagellar basal-body rod protein FlgF
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:AGB70067.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5513_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130..1344
DNA (1215bp) protein (405aa)
Flagellar protein export ATPase FliI n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFA6_RHITR
fliI; flagellar protein export ATPase FliI
Flagellar protein export ATPase FliI {ECO:0000313|EMBL:AGB70068.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5513_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1308..1520
DNA (213bp) protein (71aa)
Flagellar protein export ATPase FliI n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFA6_RHITR
fliI; flagellar protein export ATPase FliI
Flagellar protein export ATPase FliI {ECO:0000313|EMBL:AGB70068.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5513_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1573..2100
DNA (528bp) protein (176aa)
Putative flagella related protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ17_RHITR rbh
putative flagella related protein rbh
Putative flagella related protein {ECO:0000313|EMBL:AGB70069.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5513_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2219..2611
DNA (393bp) protein (131aa)
Flagellar basal body rod protein FlgB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ38_RHITR
flgB; flagellar basal body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000313|EMBL:AGB70070.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5513_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2630..3034
DNA (405bp) protein (135aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHA3_RHITR
flgC; flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5513_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3031..3381
DNA (351bp) protein (117aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFW6_RHITR
fliE; flagellar hook-basal body complex protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5513_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3479..4267
DNA (789bp) protein (263aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFB6_RHITR rbh
flgG; flagellar basal-body rod protein FlgG rbh
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:AGB70073.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_5513_9
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4302..4787
DNA (486bp) protein (162aa)
Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZ42_9RHIZ
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
flgA; flagellar basal body P-ring biosynthesis protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
SCNpilot_expt_1000_bf_scaffold_5513_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4784..5902
DNA (1119bp) protein (373aa)
Flagellar P-ring protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U162_9RHIZ rbh
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flgI; flagellar P-ring protein FlgI rbh
SCNpilot_expt_1000_bf_scaffold_5513_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5899..6432
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWY9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR82009.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
exported flagella-like protein
SCNpilot_expt_1000_bf_scaffold_5513_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6429..7139
DNA (711bp) protein (237aa)
Flagellar L-ring protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EET8_9RHIZ rbh
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
flgH; flagellar basal body L-ring protein; K02393 flagellar L-ring protein precursor FlgH rbh
SCNpilot_expt_1000_bf_scaffold_5513_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7176..7688
DNA (513bp) protein (171aa)
Flagellar transmembrane protein FliL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGY7_9RHIZ
Flagellar basal body-associated protein {ECO:0000313|EMBL:EYR82007.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fliL; flagellar transmembrane protein FliL; K02415 flagellar FliL protein
SCNpilot_expt_1000_bf_scaffold_5513_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7685..8431
DNA (747bp) protein (249aa)
flagellar biosynthesis protein FliP n=1 Tax=Rhizobium giardinii RepID=UPI0003778BB8 rbh
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EYR82006.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
fliP; flagellar biosynthetic protein FliP
SCNpilot_expt_1000_bf_scaffold_5513_15
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8671..9552
DNA (882bp) protein (294aa)
Flagellin A n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3WZ58_RHIFR rbh
Flagellin {ECO:0000313|EMBL:KJF66893.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
flaA; flagellin A rbh
SCNpilot_expt_1000_bf_scaffold_5513_16
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9808..10785
DNA (978bp) protein (326aa)
Flagellin domain protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AB47_RHIFH rbh
flaB; flagellin domain-containing protein; K02406 flagellin rbh
Flagellin domain protein {ECO:0000313|EMBL:CCE94827.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_expt_1000_bf_scaffold_5513_17
unknown

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10782..11360
DNA (579bp) protein (193aa)

This feature has no annotations

Displaying 17 items

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