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SCNpilot_expt_1000_bf_scaffold_5664

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5664_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..191
DNA (189bp) protein (63aa)
Tox1 n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3F5_PSEAI
Tox1 {ECO:0000313|EMBL:AGG19214.1}; Uncharacterized protein {ECO:0000313|EMBL:AAP22632.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5664_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(254..592)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3F6_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AGG19213.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5664_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(688..1593)
DNA (906bp) protein (302aa)
DegP n=1 Tax=Pseudomonas aeruginosa RepID=M1S0Z9_PSEAI rbh
DegP {ECO:0000313|EMBL:AGG19212.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
trypsin domain-containing protein
SCNpilot_expt_1000_bf_scaffold_5664_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1590..1811)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=M1RSX9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AGG19211.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
SCNpilot_expt_1000_bf_scaffold_5664_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1884..2273)
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=T2K1B7_ACHDE
Uncharacterized protein {ECO:0000313|EMBL:AKH45407.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
SCNpilot_expt_1000_bf_scaffold_5664_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2359..5691)
DNA (3333bp) protein (1111aa)
TraA n=1 Tax=Pseudomonas aeruginosa RepID=M1RFK1_PSEAI rbh
TraA {ECO:0000313|EMBL:AGG19209.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
traA; Conjugal transfer protein TraA
SCNpilot_expt_1000_bf_scaffold_5664_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5885..6136
DNA (252bp) protein (84aa)
TraC n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G1_PSEAI
TraC {ECO:0000313|EMBL:AKH45405.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
traC protein
SCNpilot_expt_1000_bf_scaffold_5664_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6159..6380
DNA (222bp) protein (74aa)
TraD n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G2_PSEAI
TraD {ECO:0000313|EMBL:AKH45404.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
SCNpilot_expt_1000_bf_scaffold_5664_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6412..8949
DNA (2538bp) protein (846aa)
TraG n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G3_PSEAI rbh
TraG {ECO:0000313|EMBL:AAP22624.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
conjugal transfer protein TraG
SCNpilot_expt_1000_bf_scaffold_5664_10
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8960..9352
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMU8_9XANT
Uncharacterized protein {ECO:0000313|EMBL:AJW29860.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
SCNpilot_expt_1000_bf_scaffold_5664_11
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9524..10435)
DNA (912bp) protein (304aa)
KfrA protein n=1 Tax=Pseudomonas aeruginosa RepID=A7MAI0_PSEAI rbh
KfrA protein {ECO:0000313|EMBL:AJW29861.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5664_12
unknown

Not on your lists

10471..11022
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5664_13
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11363..12481)
DNA (1119bp) protein (373aa)
Plasmid replication initiator protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3BDU0_PSEAI rbh
Replication initiation protein {ECO:0000313|EMBL:AJW29843.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
repA-like protein
SCNpilot_expt_1000_bf_scaffold_5664_14
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12535..12759)
DNA (225bp) protein (75aa)
Plasmid stabilization protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3BDD9_PSEAI
Partitioning protein B {ECO:0000313|EMBL:AJW29844.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5664_15
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12780..13412)
DNA (633bp) protein (211aa)
ParA protein n=1 Tax=Serratia marcescens RepID=Q8VW79_SERMA rbh
Partitioning protein A {ECO:0000313|EMBL:AJW29845.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
ParaA family ATPase; K03496 chromosome partitioning protein
SCNpilot_expt_1000_bf_scaffold_5664_16
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13494..13787)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1F7H2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AJW29846.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
SCNpilot_expt_1000_bf_scaffold_5664_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13784..14044)
DNA (261bp) protein (87aa)
Resolvase n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A891_PSEAI
Res {ECO:0000313|EMBL:AKH45416.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
resolvase site-specific recombinase
Displaying 17 items

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