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SCNpilot_expt_1000_bf_scaffold_5913

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5913_1
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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248..1456
DNA (1209bp) protein (403aa)
argD; Acetylornithine aminotransferase (EC:2.6.1.11) rbh
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107, ECO:0000313|EMBL:CAZ87879.1}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107, ECO:0000313|EMBL:CAZ87879.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Acetylornithine aminotransferase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CPE9_THIA3 rbh
SCNpilot_expt_1000_bf_scaffold_5913_2
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1467..1760
DNA (294bp) protein (98aa)
ornithine carbamoyltransferase n=1 Tax=Azoarcus toluclasticus RepID=UPI000371E649
ornithine carbamoyltransferase
Tax=GWF2_Sideroxydans_59_14_curated
SCNpilot_expt_1000_bf_scaffold_5913_3
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1792..2358
DNA (567bp) protein (189aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=2 Tax=Thauera RepID=N6YLW3_9RHOO
SCNpilot_expt_1000_bf_scaffold_5913_4
unknown

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comp(2419..2631)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5913_5
unknown

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comp(2782..3078)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5913_6
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3769..4602
DNA (834bp) protein (278aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=ASSY_DECAR
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_expt_1000_bf_scaffold_5913_7
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4616..6703
DNA (2088bp) protein (696aa)
Fused ATP-binding subunit of ABC superfamily protein involved in precise excision of transposons n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WA50_RALSL
Fused ATP-binding subunit of ABC superfamily protein involved in precise excision of transposons {ECO:0000313|EMBL:CCF96671.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup
SCNpilot_expt_1000_bf_scaffold_5913_8
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6525..6980)
DNA (456bp) protein (152aa)
permease n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00035FE0F3
Permease {ECO:0000313|EMBL:KDR44264.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
PGAP1 family protein; K06889
SCNpilot_expt_1000_bf_scaffold_5913_9
Burkholderia sp. 2002721687, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8647..9132
DNA (486bp) protein (162aa)
UPF0234 protein BTI_2954 n=2 Tax=Burkholderia thailandensis RepID=N0ANS2_BURTH
hypothetical protein
UPF0234 protein BW21_3095 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1468409 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. 2002721687.;"
SCNpilot_expt_1000_bf_scaffold_5913_10
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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9229..10968
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1ASU6_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:ERE07104.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5913_11
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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10944..12062
DNA (1119bp) protein (373aa)
glutamine-scyllo-inositol transaminase (EC:2.6.1.50); K00837 [EC:2.6.1.-]
Probable glutamine-scyllo-inositol transaminase {ECO:0000313|EMBL:AAQ58426.1}; EC=2.6.1.50 {ECO:0000313|EMBL:AAQ58426.1};; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
Probable glutamine-scyllo-inositol transaminase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7P019_CHRVO
SCNpilot_expt_1000_bf_scaffold_5913_12
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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12059..13099
DNA (1041bp) protein (347aa)
family 2 glycosyl transferase; K10012 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.7.8.30] rbh
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U0ZCG2_9NEIS
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase {ECO:0000313|EMBL:KIA80923.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
SCNpilot_expt_1000_bf_scaffold_5913_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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13096..13710
DNA (615bp) protein (205aa)
putative formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
formyl transferase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00037263B9
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying 13 items

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