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SCNpilot_expt_1000_bf_scaffold_4365

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4365_1
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..1607
DNA (1605bp) protein (535aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase III n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q2_PEDSD
DNA topoisomerase III {ECO:0000313|EMBL:ADY52162.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_4365_2
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1597..1896
DNA (300bp) protein (100aa)
KilA-N, DNA-binding domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q1_PEDSD
KilA-N, DNA-binding domain-containing protein
KilA-N, DNA-binding domain protein {ECO:0000313|EMBL:ADY52161.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_4365_3
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1866..2471
DNA (606bp) protein (202aa)
KilA-N, DNA-binding domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Q1_PEDSD
KilA-N, DNA-binding domain-containing protein
KilA-N, DNA-binding domain protein {ECO:0000313|EMBL:ADY52161.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_4365_4
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2495..3625)
DNA (1131bp) protein (377aa)
Chromate transporter, chromate ion transporter (CHR) family n=2 Tax=Flavobacterium RepID=A5FFK5_FLAJ1 rbh
chromate transporter; K07240 chromate transporter rbh
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:ABQ06017.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_1000_bf_scaffold_4365_5
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3615..4046)
DNA (432bp) protein (144aa)
DoxX family protein id=3538809 bin=GWF2_Bacteroidetes_49_14 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
DoxX family protein
Tax=GWF2_Bacteroidetes_49_14_curated
SCNpilot_expt_1000_bf_scaffold_4365_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(4049..4567)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKS5_9SPHI
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_4365_7
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4627..5427)
DNA (801bp) protein (267aa)
Transcriptional regulator, AraC family n=2 Tax=Flavobacterium RepID=A5FFK1_FLAJ1 rbh
helix-turn-helix domain-containing protein rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABQ06013.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_1000_bf_scaffold_4365_8
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5461..6492)
DNA (1032bp) protein (344aa)
Arsenical-resistance protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G221_9SPHI
Arsenical-resistance protein {ECO:0000313|EMBL:EEI90711.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
SCNpilot_expt_1000_bf_scaffold_4365_9
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6500..6877)
DNA (378bp) protein (126aa)
Glycine cleavage system H protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8Y4_9FLAO
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
gcvH; glycine cleavage system H protein
SCNpilot_expt_1000_bf_scaffold_4365_10
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6895..7668)
DNA (774bp) protein (258aa)
Ser/Thr phosphatase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W023_9FLAO rbh
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFK35984.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
metallophosphoesterase
SCNpilot_expt_1000_bf_scaffold_4365_11
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7699..8163)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G223_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EEI90713.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4365_12
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8221..8511)
DNA (291bp) protein (97aa)
Transcriptional regulator, ArsR family n=2 Tax=Flavobacterium RepID=A5FFL5_FLAJ1
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:EJG02242.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
Displaying 12 items

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