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SCNpilot_expt_1000_bf_scaffold_4498

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4498_1
Rhizobium phage vB_RleM_PPF1, Caudovirales, Viruses

Not on your lists

comp(2..481)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-A RepID=R9TQF3_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AID18324.1}; TaxID=1498228 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage vB_RleM_PPF1.;"
SCNpilot_expt_1000_bf_scaffold_4498_2
Rhizobium phage vB_RleM_PPF1, Caudovirales, Viruses

Not on your lists

comp(506..892)
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:AID18323.1}; TaxID=1498228 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage vB_RleM_PPF1.;"
SCNpilot_expt_1000_bf_scaffold_4498_3
Aurantimonas phage AmM-1, Caudovirales, Viruses

Not on your lists

comp(894..1922)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037342EE rbh
Major capsid {ECO:0000313|EMBL:BAP94464.1}; TaxID=1503929 species="Viruses; unclassified phages.;" source="Aurantimonas phage AmM-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4498_4
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1937..2575)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HQ69_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ63509.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4498_5
Aurantimonas phage AmM-1, Caudovirales, Viruses

Not on your lists

comp(2588..3634)
DNA (1047bp) protein (349aa)
Peptidase S14, ClpP n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LP19_RHITR
Clp protease {ECO:0000313|EMBL:BAP94462.1}; TaxID=1503929 species="Viruses; unclassified phages.;" source="Aurantimonas phage AmM-1.;"
peptidase S14, ClpP
SCNpilot_expt_1000_bf_scaffold_4498_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3650..3919)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-A RepID=R9TS76_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:CDX55901.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_expt_1000_bf_scaffold_4498_7
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3919..5382)
DNA (1464bp) protein (488aa)
Capsid protein of prophage n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PUL4_PSEUV rbh
capsid protein of prophage rbh
Capsid protein of prophage {ECO:0000313|EMBL:AEV37546.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
SCNpilot_expt_1000_bf_scaffold_4498_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..6542)
DNA (1011bp) protein (337aa)
Terminase GpA n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K075_9RHIZ rbh
Terminase GpA {ECO:0000313|EMBL:EXL07413.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
phage terminase large subunit (GpA) rbh
SCNpilot_expt_1000_bf_scaffold_4498_9
unknown

Not on your lists

6713..7435
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4498_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7585..8223)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNZ3_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71829.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_4498_11
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8376..8903)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-A RepID=R9TQF7_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:KEQ06420.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
prophage LambdaW5, minor tail protein Z
SCNpilot_expt_1000_bf_scaffold_4498_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8997..9833)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K3B2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX55908.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4498_13
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10249..12033)
DNA (1785bp) protein (595aa)
DNA primase n=1 Tax=Rhizobium phage RR1-A RepID=R9TSC7_9CAUD rbh
Uncharacterized protein {ECO:0000313|EMBL:EXL07409.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
phage/plasmid primase, P4 family; K06919 putative DNA primase/helicase rbh
SCNpilot_expt_1000_bf_scaffold_4498_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12030..12362)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI000307D2D4
P4 alpha zinc-binding domain protein {ECO:0000313|EMBL:CDX55910.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
P4 alpha zinc-binding domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4498_15
unknown

Not on your lists

12592..12894
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 15 items

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