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SCNpilot_expt_1000_bf_scaffold_4543

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4543_1

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658..1128
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PRC6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH97481.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4543_2
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1125..2039
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023761FE
hypothetical protein; K09144 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF08445.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_expt_1000_bf_scaffold_4543_3
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2280..3029)
DNA (750bp) protein (250aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
TatD-related deoxyribonuclease n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNC4_RALME
TatD-related deoxyribonuclease {ECO:0000313|EMBL:ABF08352.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_expt_1000_bf_scaffold_4543_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3043..4410)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WDL3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37386.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4543_5
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4407..5291)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNC2_RALME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF08354.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
SCNpilot_expt_1000_bf_scaffold_4543_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5291..7126)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XC20_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37384.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
KAP P-loop
SCNpilot_expt_1000_bf_scaffold_4543_7
unknown

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comp(7365..7775)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4543_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7830..8180
DNA (351bp) protein (117aa)
Transcriptional regulator, XRE family n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JC78_BURP8
Putative transcriptional regulator {ECO:0000313|EMBL:KDM68374.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4543_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8210..8677
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTI3_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ44880.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Displaying 9 items

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