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SCNpilot_expt_1000_bf_scaffold_7977

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7977_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..97)
DNA (96bp) protein (32aa)
Putative uncharacterized protein id=1361659 bin=GWE1_T_denit_62_9 species=Xanthomonas fuscans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
SCNpilot_expt_1000_bf_scaffold_7977_2
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(447..947)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAS0_9PROT
hypothetical protein
Tax=CG_Beta_01
SCNpilot_expt_1000_bf_scaffold_7977_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(973..1203)
DNA (231bp) protein (77aa)
hypothetical protein id=12494074 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_7977_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1184..1423)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHL1_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34009.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_expt_1000_bf_scaffold_7977_5
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1435..1851)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9F3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34010.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_expt_1000_bf_scaffold_7977_6
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1912..2502)
DNA (591bp) protein (197aa)
TetR family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE55_9PROT rbh
TetR family transcriptional regulator rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:BAN34011.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_expt_1000_bf_scaffold_7977_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2610..2813)
DNA (204bp) protein (68aa)
Lytic murein transglycosylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ALE1_9PROT
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:BAN35504.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_expt_1000_bf_scaffold_7977_8
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2845..3351
DNA (507bp) protein (169aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GC0_DECAR
PAS/PAC/Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:BAO28507.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
SCNpilot_expt_1000_bf_scaffold_7977_9
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3434..3820)
DNA (387bp) protein (129aa)
Transposase IS4 family protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JW63_BURP8
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ACC75190.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
SCNpilot_expt_1000_bf_scaffold_7977_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3790..4212)
DNA (423bp) protein (141aa)
Transposase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBN5_9BURK
transposase
Transposase {ECO:0000313|EMBL:AFU46721.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_7977_11
unknown

Not on your lists

comp(4212..4367)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7977_12
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4364..6166)
DNA (1803bp) protein (601aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum F11 RepID=G2T7V5_RHORU
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Gammaproteobacteria_62_13__curated
SCNpilot_expt_1000_bf_scaffold_7977_13
unknown

Not on your lists

6537..6758
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_7977_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6695..6895)
DNA (201bp) protein (67aa)
thiosulfate sulfurtransferase (EC:2.8.1.1)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00035F78AD
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 14 items

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