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SCNpilot_expt_1000_bf_scaffold_6141

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6141_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60..500)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4JKB3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH79098.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
SCNpilot_expt_1000_bf_scaffold_6141_2
unknown

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comp(883..1029)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6141_3
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1044..1952)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=C6BDK0_RALP1 rbh
LysR family transcriptional regulator rbh
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:AJE97696.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_expt_1000_bf_scaffold_6141_4
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(2131..3378)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CQV8_THIA3
Conserved hypothetical protein; putative FAD/NAD(P) domain
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
SCNpilot_expt_1000_bf_scaffold_6141_5
unknown

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3453..3638
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6141_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3722..3874
DNA (153bp) protein (51aa)
Transposase n=1 Tax=Acidovorax sp. CF316 RepID=J0KL98_9BURK
Transposase {ECO:0000313|EMBL:EJE54415.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
transposase IS200-like; K07491 putative transposase
SCNpilot_expt_1000_bf_scaffold_6141_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3893..4153
DNA (261bp) protein (87aa)
Transposase n=1 Tax=Acidovorax sp. CF316 RepID=J0KL98_9BURK
transposase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCNpilot_expt_1000_bf_scaffold_6141_8
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4278..4640
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036BB30A
hypothetical protein; K02019 molybdate transport system regulatory protein
Tax=RBG_16_Gallionellales_56_9_curated
SCNpilot_expt_1000_bf_scaffold_6141_9
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4892..5266)
DNA (375bp) protein (125aa)
Putative regulator putative molybdate and DNA-binding domains, excisionase family protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA3_METED
regulator; molybdate and DNA-binding domains, excisionase family protein; K07219 putative molybdopterin biosynthesis protein
Putative regulator putative molybdate and DNA-binding domains, excisionase family protein {ECO:0000313|EMBL:CAX24301.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_expt_1000_bf_scaffold_6141_10
unknown

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5417..5875
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6141_11
unknown

Not on your lists

5983..6129
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6141_12
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6126..6896
DNA (771bp) protein (257aa)
molybdate ABC transporter substrate-binding protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035D3575
modA-2; molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
SCNpilot_expt_1000_bf_scaffold_6141_13
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6927..7445
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036A9BCB
Uncharacterized protein {ECO:0000313|EMBL:AJE23256.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6141_14
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7424..7735
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=H5JTS8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AJE23256.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
Hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6141_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7750..8427
DNA (678bp) protein (226aa)
molybdenum ABC transporter permease n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003718592
molybdate ABC transporter inner membrane subunit; K02018 molybdate transport system permease protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_expt_1000_bf_scaffold_6141_16
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8417..9496
DNA (1080bp) protein (360aa)
modC; molybdenum ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] rbh
Molybdenum import ATP-binding protein ModC {ECO:0000255|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000255|HAMAP-Rule:MF_01705};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
molybdenum ABC transporter ATP-binding protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00038139F9
SCNpilot_expt_1000_bf_scaffold_6141_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9307..9729)
DNA (423bp) protein (141aa)
IstB domain protein ATP-binding protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLY9_RUBGI
istB; IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:BAL94026.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_expt_1000_bf_scaffold_6141_18
unknown

Not on your lists

comp(9821..9943)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6141_19
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10120..10386)
DNA (267bp) protein (89aa)
Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=C6BDK0_RALP1
LysR family transcriptional regulator
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:AJE97696.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
Displaying 19 items

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