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SCNpilot_expt_1000_bf_scaffold_6543

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6543_1
unknown

Not on your lists

comp(187..960)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6543_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1741..1965
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B811_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59769.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_6543_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1962..3713
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9R9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AGK59768.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_6543_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3759..4094)
DNA (336bp) protein (112aa)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH49_AFIFE
Copper-exporting P-type ATPase A {ECO:0000313|EMBL:CEG09206.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
heavy metal translocating p-type atpase
SCNpilot_expt_1000_bf_scaffold_6543_5
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4419..5480
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF05625.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
SCNpilot_expt_1000_bf_scaffold_6543_6
unknown

Not on your lists

5565..5795
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6543_7
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5732..6007)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLF5_AFIFE
Transcriptional regulator {ECO:0000313|EMBL:KIF65884.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6543_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6146..6505
DNA (360bp) protein (120aa)
Transcriptional regulator, ArsR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T8_PHEZH
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_expt_1000_bf_scaffold_6543_9
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6502..6951
DNA (450bp) protein (150aa)
Lactoylglutathione lyase, glyoxalase family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHI3_PHEZH
lactoylglutathione lyase, glyoxalase
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_expt_1000_bf_scaffold_6543_10
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6959..7483
DNA (525bp) protein (175aa)
Arsenate reductase {ECO:0000313|EMBL:GAM98136.1}; EC=1.20.4.1 {ECO:0000313|EMBL:GAM98136.1};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
arsC; arsenate reductase (EC:1.20.4.1 3.1.3.48)
Arsenate reductase / phosphotyrosine protein phosphatase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAX3_HYPSM
SCNpilot_expt_1000_bf_scaffold_6543_11
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7486..8205
DNA (720bp) protein (240aa)
Permease, glycerol uptake facilitator n=1 Tax=Caulobacter sp. AP07 RepID=J2PFM5_9CAUL rbh
MIP family channel protein {ECO:0000313|EMBL:KKC24817.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
MIP family protein rbh
SCNpilot_expt_1000_bf_scaffold_6543_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8202..8633
DNA (432bp) protein (144aa)
arsC; arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Arsenate reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T5_PHEZH
SCNpilot_expt_1000_bf_scaffold_6543_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8731..10716
DNA (1986bp) protein (662aa)
Conjugal transfer coupling protein TraG n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BH45_9RHIZ rbh
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:AGK59766.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
conjugal transfer coupling protein TraG rbh
SCNpilot_expt_1000_bf_scaffold_6543_14
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10723..11169
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAL7_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57175.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_6543_15
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11143..12081)
DNA (939bp) protein (313aa)
hypothetical protein SMAC_09816, partial n=1 Tax=Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) RepID=UPI0001BF5AAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KCZ95292.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hirschiana VP5.;"
SCNpilot_expt_1000_bf_scaffold_6543_16
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12213..12539
DNA (327bp) protein (109aa)
Conjugal transfer protein TrbB n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAL3_9RHIZ
conjugal transfer protein TrbB
Conjugal transfer protein TrbB {ECO:0000313|EMBL:AGK57170.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying 16 items

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